SCUBA

Mast Cell Identity

Gene co-expression module in Mast cells

CategoryMast cell development
Genes0
Annotation certainty3 of 5
Annotation consistency8 of 27 genes have a known function matching the annotation

View this module in SCUBA

Why this annotation

Hub genes include MS4A4A (MS4A family, expressed on mast cells and macrophages), FPR3 (formyl peptide receptor 3, innate immune pattern recognition, expressed on mast cells/monocytes), CADM1 (cell adhesion molecule 1, critical for mast cell identity, tissue retention, and IgE receptor signaling), IGSF3 (immunoglobulin superfamily member 3), ABCB1 (MDR1/P-glycoprotein, drug efflux transporter), GLIPR1 (immune modulator/tumor suppressor), RGS5 (regulator of G-protein signaling), MMP7 (matrix metalloprotease 7), MINDY3 (deubiquitinase). CADM1, MS4A4A, and FPR3 are strong mast cell identity markers. CADM1 in particular is a defining mast cell surface molecule. This module represents mast cell identity with innate immune sensing capacity.

Genes

Most correlated modules

Module annotations were drafted by a large language model from the module's genes, then reviewed and approved by a domain expert. See sources & licences.