SCUBA

Metallothionein Response

Gene co-expression module in Colonocytes

CategoryStress
Genes0
Annotation certainty5 of 5
Annotation consistency8 of 8 genes have a known function matching the annotation

View this module in SCUBA

Why this annotation

All 8 genes are metallothioneins (MT1X, MT1E, MT1F, MT1G, MT2A, MT1M, MT1H, MT1A) — small cysteine-rich proteins that bind heavy metals (zinc, copper) and protect against oxidative stress. The module is significantly downregulated with inflammation (delta_inflammation = -0.910, sig.) and restored with UC remission (delta_remission_UC = 1.108, sig.), consistent with metallothionein suppression during inflammatory stress and recovery during healing. Enriched in BEST4+ colonocytes. This is a tightly coherent, unambiguous metallothionein/metal stress response module.

Genes

Most correlated modules

Module annotations were drafted by a large language model from the module's genes, then reviewed and approved by a domain expert. See sources & licences.