SCUBA

KHDRBS2 — KH RNA binding domain containing, signal transduction associated 2

KHDRBS2 belongs to a gene co-expression module in 1 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

KHDRBS2's module in each cell type

Cell typeModuleShares the module with
EnterocytesLong-gene Nuclear Transcripts
Technical artifact
ADAMTSL1, LIN7A, OPCML, PAQR5, PIGZ, PLCL1, RALYL, RFLNB +3 moreView in SCUBA

About the gene

SynonymsMGC26664, SLM-1, SLM1
Chromosome6: 61679961-62286225
Predicted locationIntracellular
Essential geneNo
Protein classPredicted intracellular proteins
Molecular functionRNA-binding
Biological processmRNA processing, Transcription, Transcription regulation

Function

RNA-binding protein that plays a role in the regulation of alternative splicing and influences mRNA splice site selection and exon inclusion. Binds both poly(A) and poly(U) homopolymers. Phosphorylation by PTK6 inhibits its RNA-binding ability (By similarity). Induces an increased concentration-dependent incorporation of exon in CD44 pre- mRNA by direct binding to purine-rich exonic enhancer. Can regulate alternative splicing of NRXN1 in the laminin G-like domain 6 containing the evolutionary conserved neurexin alternative spliced segment 4 (AS4) involved in neurexin selective targeting to postsynaptic partners. Regulates cell-type specific alternative splicing of NRXN1 at AS4 and acts synergystically with SAM68 in exon skipping. In contrast acts antagonistically with SAM68 in NRXN3 exon skipping at AS4. Its phosphorylation by FYN inhibits its ability to regulate splice site selection. May function as an adapter protein for Src kinases during mitosis

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.