SCUBA

ATG4C — Autophagy related 4C cysteine peptidase

ATG4C belongs to a gene co-expression module in 1 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

ATG4C's module in each cell type

Cell typeModuleShares the module with
MacrophagesEndosomal Membrane Trafficking
Vesicular traficking
A2M, AP1B1, ARHGAP4, ARHGEF6, B3GNT7, CRTAP, ETV5, FYB1 +20 moreView in SCUBA

About the gene

SynonymsAPG4C, AUTL1, AUTL3, FLJ14867
Chromosome1: 62784132-62865516
Predicted locationIntracellular
Essential geneNo
Protein classEnzymes, Predicted intracellular proteins
Molecular functionHydrolase, Protease, Thiol protease
Biological processAutophagy, Protein transport, Transport, Ubl conjugation pathway

Function

Cysteine protease that plays a key role in autophagy by mediating both proteolytic activation and delipidation of ATG8 family proteins. The protease activity is required for proteolytic activation of ATG8 family proteins: cleaves the C-terminal amino acid of ATG8 proteins MAP1LC3 and GABARAPL2, to reveal a C-terminal glycine. Exposure of the glycine at the C-terminus is essential for ATG8 proteins conjugation to phosphatidylethanolamine (PE) and insertion to membranes, which is necessary for autophagy (By similarity). In addition to the protease activity, also mediates delipidation of ATG8 family proteins. Catalyzes delipidation of PE-conjugated forms of ATG8 proteins during macroautophagy. Compared to ATG4B, the major protein for proteolytic activation of ATG8 proteins, shows weaker ability to cleave the C-terminal amino acid of ATG8 proteins, while it displays stronger delipidation activity. In contrast to other members of the family, weakly or not involved in phagophore growth during mitophagy.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.