SCUBA

CDH5 — Cadherin 5

CDH5 belongs to a gene co-expression module in 1 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

CDH5's module in each cell type

Cell typeModuleShares the module with
EndothelialEndothelial Junction Identity
Endothelial cell development
ADGRF5, AKAP13, CXCL12, DENND5A, FGF12, FURIN, HSPA12B, NES +13 moreView in SCUBA

About the gene

Synonyms7B4, CD144
Chromosome16: 66366622-66404784
Predicted locationIntracellular, Membrane
Essential geneNo
Protein classCancer-related genes, CD markers, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Biological processCell adhesion

Function

Cadherins are calcium-dependent cell adhesion proteins (By similarity). They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. This cadherin may play a important role in endothelial cell biology through control of the cohesion and organization of the intercellular junctions (By similarity). It associates with alpha-catenin forming a link to the cytoskeleton. Plays a role in coupling actin fibers to cell junctions in endothelial cells, via acting as a cell junctional complex anchor for AMOTL2 and MAGI1 (By similarity). Acts in concert with KRIT1 and PALS1 to establish and maintain correct endothelial cell polarity and vascular lumen (By similarity). These effects are mediated by recruitment and activation of the Par polarity complex and RAP1B. Required for activation of PRKCZ and for the localization of phosphorylated PRKCZ, PARD3, TIAM1 and RAP1B to the cell junction. Associates with CTNND1/p120-catenin to control CADH5 endocytosis (By similarity).

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.