SCUBA

AKAP13 — A-kinase anchoring protein 13

AKAP13 belongs to a gene co-expression module in 12 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

AKAP13's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsChromatin Modification
DNA/chromatin regulation
CREBRF, EPC1, GCC2, GPBP1, JMJD1C, KMT2E, OFD1, PPP1R2 +6 moreView in SCUBA
CD4⁺ T cellsMAF regulatory program
Immune regulation
ARID4B, DTHD1, FYN, IKZF3, ISCU, LIMA1, LIMS1, MAF +12 moreView in SCUBA
CD8⁺ T cellsCD8 Effector Maturation
T cell maturation
ATXN1, CD81, DDX17, DDX3X, ETS1, IKZF3, JUND, MXD4 +8 moreView in SCUBA
EndothelialEndothelial Junction Identity
Endothelial cell development
ADGRF5, CDH5, CXCL12, DENND5A, FGF12, FURIN, HSPA12B, NES +13 moreView in SCUBA
Gamma-delta T cellsChromatin Remodeling Signaling
DNA/chromatin regulation
BPTF, CARNMT1, CCDC6, CFLAR, CLASP1, CLASP2, DOCK10, FBXW7 +23 more
Goblet cellsDUOX2 Epithelial Inflammation
Stress
BIRC3, DUOX2, DUOXA2, DUSP4, IL2RG, IL32, ISG15, RNF213 +1 moreView in SCUBA
Innate lymphoid cellsNK ILC Tissue Homing
Homing & TEM
ADGRE5, AREG, ARL4C, ATP1B3, B3GNT7, BTG1, CCDC107, CCR6 +25 moreView in SCUBA
Lymphatic endothelialNF-κB Innate Signaling
Inflammation
B4GALT5, BACH1, CHD2, CNST, DENND5A, HIVEP1, HIVEP2, IRAK2 +11 moreView in SCUBA
MacrophagesEpigenetic Remodeling
Housekeeping
AFF4, AGO3, ARID4B, ASH1L, CYTH1, ELF1, EPC1, JMJD1C +16 moreView in SCUBA
Mucosal-associated invariant T cellSTAT3 Cytokine Signaling
Inflammation
AKIRIN2, AKNA, ARGLU1, BDP1, GOLGB1, H1-2, LCP1, PPP4R3B +4 more
Natural Killer cellsNK Immune Checkpoint
Immune regulation
CHD1, G3BP2, LIMS1, MORF4L2, P2RY10, PTPN22, RANBP2, SAMSN1 +1 moreView in SCUBA
Smooth muscle cellsXBP1 UPR Response
Protein processing & ER
ADAMTS10, ATP1A1, BATF3, BNIP3L, CHRD, DLC1, HERPUD1, MICAL1 +5 moreView in SCUBA

About the gene

SynonymsAKAP-Lbc, ARHGEF13, BRX, c-lbc, HA-3, Ht31, LBC, PROTO-LB
Chromosome15: 85380571-85749358
Predicted locationIntracellular
Essential geneNo
Protein classPlasma proteins, Predicted intracellular proteins
Molecular functionGuanine-nucleotide releasing factor

Function

Scaffold protein that plays an important role in assembling signaling complexes downstream of several types of G protein-coupled receptors. Activates RHOA in response to signaling via G protein- coupled receptors via its function as Rho guanine nucleotide exchange factor. May also activate other Rho family members. Part of a kinase signaling complex that links ADRA1A and ADRA1B adrenergic receptor signaling to the activation of downstream p38 MAP kinases, such as MAPK11 and MAPK14. Part of a signaling complex that links ADRA1B signaling to the activation of RHOA and IKBKB/IKKB, leading to increased NF-kappa-B transcriptional activity. Part of a RHOA-dependent signaling cascade that mediates responses to lysophosphatidic acid (LPA), a signaling molecule that activates G-protein coupled receptors and potentiates transcriptional activation of the glucocorticoid receptor NR3C1. Part of a signaling cascade that stimulates MEF2C- dependent gene expression in response to lysophosphatidic acid (LPA) (By similarity). Part of a signaling pathway that activates MAPK11 and/or MAPK14 and leads to increased transcription activation of the estrogen receptors ESR1 and ESR2. Part of a signaling cascade that links cAMP and EGFR signaling to BRAF signaling and to PKA-mediated phosphorylation of KSR1, leading to the activation of downstream MAP kinases, such as MAPK1 or MAPK3. Functions as a scaffold protein that anchors cAMP- dependent protein kinase (PKA) and PRKD1. This promotes activation of PRKD1, leading to increased phosphorylation of HDAC5 and ultimately cardiomyocyte hypertrophy (By similarity). Has no guanine nucleotide exchange activity on CDC42, Ras or Rac. Required for normal embryonic heart development, and in particular for normal sarcomere formation in the developing cardiomyocytes (By similarity). Plays a role in cardiomyocyte growth and cardiac hypertrophy in response to activation of the beta-adrenergic receptor by phenylephrine or isoproterenol. Required for normal adaptive cardiac hypertrophy in response to pressure overload. Plays a role in osteogenesis (By similarity).

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.