SCUBA

APOBEC3H — Apolipoprotein B mRNA editing enzyme catalytic subunit 3H

APOBEC3H belongs to a gene co-expression module in 2 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

APOBEC3H's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsp53 DNA-damage response
Stress
AEN, BBC3, DDB2, FDXR, GZMH, PHLDA3, PKIG, RCAN2View in SCUBA
CD8⁺ T cellsCytotoxic Effector
cytotoxicity
B2M, CCL4, CCL5, CD52, CYBA, GZMH, HCST, HLA-A +4 moreView in SCUBA

About the gene

SynonymsARP10
Chromosome22: 39097224-39104067
Predicted locationIntracellular
Essential geneNo
Protein classEnzymes, Predicted intracellular proteins
Molecular functionHydrolase
Biological processAntiviral defense, Immunity, Innate immunity

Function

DNA deaminase (cytidine deaminase) which acts as an inhibitor of retrovirus replication and retrotransposon mobility via deaminase- dependent and -independent mechanisms. The A3H-var/haplotype 2 exhibits antiviral activity against vif-deficient HIV-1. After the penetration of retroviral nucleocapsids into target cells of infection and the initiation of reverse transcription, it can induce the conversion of cytosine to uracil in the minus-sense single-strand viral DNA, leading to G-to-A hypermutations in the subsequent plus-strand viral DNA. The resultant detrimental levels of mutations in the proviral genome, along with a deamination-independent mechanism that works prior to the proviral integration, together exert efficient antiretroviral effects in infected target cells. Selectively targets single-stranded DNA and does not deaminate double-stranded DNA or single- or double-stranded RNA. Exhibits antiviral activity also against T-cell leukemia virus type 1 (HTLV-1) and may inhibit the mobility of LTR and non-LTR retrotransposons.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.