SCUBA

CCDC47 — Coiled-coil domain containing 47

CCDC47 belongs to a gene co-expression module in 1 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

CCDC47's module in each cell type

Cell typeModuleShares the module with
MacrophagesmRNA Splicing Processing
Housekeeping
AP3D1, BAZ1B, CHTOP, CTCF, EIF1AX, EIF3A, HDLBP, HNRNPD +29 moreView in SCUBA

About the gene

SynonymsGK001
Chromosome17: 63745255-63776351
Predicted locationIntracellular, Membrane
Essential geneNo
Protein classDisease related genes, Potential drug targets, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Molecular functionChaperone

Function

Component of the multi-pass translocon (MPT) complex that mediates insertion of multi-pass membrane proteins into the lipid bilayer of membranes. The MPT complex takes over after the SEC61 complex: following membrane insertion of the first few transmembrane segments of proteins by the SEC61 complex, the MPT complex occludes the lateral gate of the SEC61 complex to promote insertion of subsequent transmembrane regions. Within the MPT complex, the PAT subcomplex sequesters any highly polar regions in the transmembrane domains away from the non-polar membrane environment until they can be buried in the interior of the fully assembled protein (By similarity). Within the PAT subcomplex, CCDC47 occludes the lateral gate of the SEC61 complex (By similarity). Involved in the regulation of calcium ion homeostasis in the ER. Required for proper protein degradation via the ERAD (ER-associated degradation) pathway. Has an essential role in the maintenance of ER organization during embryogenesis (By similarity).

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.