SCUBA

RBM7 — RNA binding motif protein 7

RBM7 belongs to a gene co-expression module in 1 of 30 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

RBM7's module in each cell type

Cell typeModuleShares the module with
ColonocytesGPCR Peptide Signaling
Secretion
ABHD11, AKIRIN1, AVPI1, BAG1, DNAJA1, DNAJA2, EDN1, FBXO33 +31 moreView in SCUBA

About the gene

Chromosome11: 114400030-114414203
Predicted locationIntracellular
Essential geneNo
Protein classPredicted intracellular proteins
Molecular functionRNA-binding
Biological processMeiosis

Function

RNA-binding subunit of the trimeric nuclear exosome targeting (NEXT) complex, a complex that functions as an RNA exosome cofactor that directs a subset of non-coding short-lived RNAs for exosomal degradation. NEXT is involved in surveillance and turnover of aberrant transcripts and non-coding RNAs. Binds preferentially polyuridine sequences and associates with newly synthesized RNAs, including pre- mRNAs and short-lived exosome substrates such as promoter upstream transcripts (PROMPTs), enhancer RNAs (eRNAs), and 3'-extended products from small nuclear RNAs (snRNAs). Participates in several biological processes including DNA damage response (DDR) and stress response. During stress response, activation of the p38MAPK-MK2 pathway decreases RBM7-RNA-binding and subsequently the RNA exosome degradation activities, thereby modulating the turnover of non-coding transcriptome. Participates in DNA damage response (DDR), through its interaction with MEPCE and LARP7, the core subunits of 7SK snRNP complex, that release the positive transcription elongation factor b (P-TEFb) complex from the 7SK snRNP. In turn, activation of P-TEFb complex induces the transcription of P- TEFb-dependent DDR genes to promote cell viability.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.