SCUBA

Colonocyte Differentiation

Gene co-expression module in Colorectal carcinoma

CategoryHousekeeping
Genes0
Annotation certainty4 of 5
Annotation consistency8 of 16 genes have a known function matching the annotation

Why this annotation

CDH17 (liver-intestine cadherin, canonical colonocyte differentiation marker), HEPH (hephaestin, iron oxidase expressed in differentiated intestinal epithelium), CYP3A5 (cytochrome P450 3A5, drug/xenobiotic metabolism — colonocyte function), CES2 (carboxylesterase 2, intestinal drug metabolism), ABCC3 (MRP3, organic anion transporter), TXNIP (thioredoxin-interacting protein, metabolic stress/differentiation), GSN (gelsolin, actin remodeling), DUSP4 (MAPK phosphatase, negative feedback), MGLL (monoglyceride lipase, lipid metabolism), CAMK2N1 (CaMKII inhibitor). This is a colonocyte differentiation/xenobiotic metabolism module reflecting well-differentiated CRC or normal colonocyte-like tumor cells.

Genes

Most correlated modules

Module annotations were drafted by a large language model from the module's genes, then reviewed and approved by a domain expert. See sources & licences.