SCUBA

cDC2 Identity

Gene co-expression module in Dendritic cells

CategoryDevelopment
Genes0
Annotation certainty5 of 5
Annotation consistency16 of 20 genes have a known function matching the annotation

View this module in SCUBA

Why this annotation

Hub genes MRC1, CSF1R, CLEC10A, CYBB, FCGR2A/B, CX3CR1, TLR2, NAIP, PILRA, IGSF6, PID1 are all canonical cDC2 identity markers. The module is core coherence, strongly enriched in cDC2 (up to 9.8x), and represents the transcriptional identity program of conventional type 2 dendritic cells in the gut. CD4 co-expression is consistent with gut cDC2s. No inflammatory activation signal; this is a steady-state identity module.

Genes

Most correlated modules

Module annotations were drafted by a large language model from the module's genes, then reviewed and approved by a domain expert. See sources & licences.