SCUBA

PLEKHM1 — Pleckstrin homology and RUN domain containing M1

PLEKHM1 belongs to a gene co-expression module in 2 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

PLEKHM1's module in each cell type

Cell typeModuleShares the module with
Gamma-delta T cellsTranscription-RNA Coupling
DNA/chromatin regulation
AKNA, AP1G1, BTAF1, BZW1, CRNKL1, DDX6, DNTTIP2, DYNC1H1 +26 more
Mucosal-associated invariant T cellNuclear-Cytoplasmic Transport
Housekeeping
AP1G1, CNOT1, INO80D, JARID2, NAA50, NUP98, PLEKHA2, RANBP2 +3 more

About the gene

SynonymsKIAA0356
Chromosome17: 45435900-45490758
Predicted locationIntracellular
Essential geneYes
Protein classDisease related genes, Essential proteins, Human disease related genes, Predicted intracellular proteins
Biological processAutophagy, Protein transport, Transport

Function

Acts as a multivalent adapter protein that regulates Rab7- dependent and HOPS complex-dependent fusion events in the endolysosomal system and couples autophagic and the endocytic trafficking pathways. Acts as a dual effector of RAB7A and ARL8B that simultaneously binds these GTPases, bringing about clustering and fusion of late endosomes and lysosomes. Required for late stages of endolysosomal maturation, facilitating both endocytosis- mediated degradation of growth factor receptors and autophagosome clearance. Interaction with Arl8b is a crucial factor in the terminal maturation of autophagosomes and to mediate autophagosome-lysosome fusion. Positively regulates lysosome peripheral distribution and ruffled border formation in osteoclasts (By similarity). May be involved in negative regulation of endocytic transport from early endosome to late endosome/lysosome implicating its association with Rab7. May have a role in sialyl-lex- mediated transduction of apoptotic signals. Involved in bone resorption (By similarity). (Microbial infection) In case of infection contributes to Salmonella typhimurium pathogenesis by supporting the integrity of the Salmonella-containing vacuole (SCV) probably in concert with the HOPS complex and Rab7

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.