SCUBA

BMP-ID3 Matricellular

Gene co-expression module in Smooth muscle cells

CategoryDevelopment
Genes8
Annotation certainty2 of 5
Annotation consistency5 of 8 genes have a known function matching the annotation

View this module in SCUBA

Why this annotation

Hub genes ID3 (BMP-induced HLH inhibitor) together with DKK3 (Wnt antagonist), SMOC2 and HAPLN3 (matricellular/hyaluronan-link proteins) define a BMP/Wnt-modulated matricellular program; TAGLN2, SH3BGRL3, ANXA1 and STOM are membrane/actin-associated genes typical of a synthetic/adventitial mural state. Its neighbor M22 contains BMP2 and other secretory genes, supporting a shared BMP-signalling axis rather than a contamination or stress program. Coherence strong but the gene set spans signalling and matrix, so certainty is moderate.

Genes

ANXA1, DKK3, HAPLN3, ID3, SH3BGRL3, SMOC2, STOM, TAGLN2

Most correlated modules

Module annotations were drafted by a large language model from the module's genes, then reviewed and approved by a domain expert. See sources & licences.