SCUBA

Lysosomal proteases

Gene co-expression module in CD19⁺ B cells

CategoryProtein processing & ER
Genes11
Annotation certainty4 of 5
Annotation consistency8 of 11 genes have a known function matching the annotation

View this module in SCUBA

Why this annotation

Dominated by lysosomal cathepsins (CTSZ, CTSC, CTSD, CTSA), GRN (progranulin), CD63, PSAP-like lysosomal/antigen-processing machinery. This is a clear lysosomal/endolysosomal protease program associated with antigen processing and presentation, characteristic of activated/antigen-presenting B cells.

Genes

CD63, CD82, CNPY3, CTSA, CTSC, CTSD, CTSZ, FUT8, GALNT1, GRN, STAMBPL1

Most correlated modules

Module annotations were drafted by a large language model from the module's genes, then reviewed and approved by a domain expert. See sources & licences.