SCUBA

Neuroprotective Secretory

Gene co-expression module in Glial cells

CategoryNeroprotection
Genes10
Annotation certainty4 of 5
Annotation consistency8 of 10 genes have a known function matching the annotation

View this module in SCUBA

Why this annotation

TTR (transthyretin) is a secreted protein with well-established neuroprotective and antioxidant properties, expressed by choroid plexus and glial cells. SELENOP encodes selenoprotein P, a major selenium transporter with neuroprotective functions. TXNIP is a thioredoxin-interacting protein involved in redox homeostasis. IGFBP6 modulates IGF signaling. LRRTM1 is a synaptic leucine-rich repeat transmembrane protein. ANGPTL7 is involved in ECM and tissue homeostasis. PRELP is a proteoglycan linking ECM to cell surfaces. APCDD1 inhibits Wnt signaling. PDLIM2 is a PDZ-LIM scaffold. WDR86 is less characterized. The strongest inflammation delta of the batch (UC -1.058, CD -0.900, both significant), with strong remission recovery. TTR and SELENOP define a neuroprotective secretory program, consistent with glial protection of the enteric nervous system.

Genes

ANGPTL7, APCDD1, IGFBP6, LRRTM1, PDLIM2, PRELP, SELENOP, TTR, TXNIP, WDR86

Most correlated modules

Module annotations were drafted by a large language model from the module's genes, then reviewed and approved by a domain expert. See sources & licences.