COL16A1 — Collagen type XVI alpha 1 chain
COL16A1 belongs to a gene co-expression module in 3 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.
COL16A1's module in each cell type
| Cell type | Module | Shares the module with | |
|---|---|---|---|
| Fibroblasts | CCL11 Secretory Fibroblast ECM production | ANK3, ARHGAP24, CCL11, COL18A1, DTX4, F11R, GABRA2, KAZN +5 more | View in SCUBA |
| Glial cells | RNA Splicing Regulation RNA processing & translation | ARGLU1, DDX17, DST, LUC7L3, N4BP2L2, NRBP2, PNISR, SYNE2 +2 more | View in SCUBA |
| Goblet cells | Inflammatory Goblet Remodeling Stress | C2CD4A, CLCA1, FMOD, GALNT8, GPX2, IFITM2, KCNE3, LYZ +3 more | View in SCUBA |
About the gene
| Chromosome | 1: 31652263-31704319 |
|---|---|
| Predicted location | Intracellular, Secreted |
| Essential gene | No |
| Protein class | Predicted intracellular proteins, Predicted secreted proteins |
| Biological process | Cell adhesion |
Function
Involved in mediating cell attachment and inducing integrin- mediated cellular reactions, such as cell spreading and alterations in cell morphology
Human Protein Atlas · Open Targets · UniProt
Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.