SCUBA

Mural/Pericyte Identity

Gene co-expression module in Smooth muscle cells

CategoryDevelopment
Genes15
Annotation certainty4 of 5
Annotation consistency10 of 15 genes have a known function matching the annotation

View this module in SCUBA

Why this annotation

Hub genes NOTCH3, MCAM (CD146), ITGA7, NTN4 and the mural transcription factors EBF1, MEF2C, ZFHX3 constitute the canonical mural/pericyte identity program (NOTCH3-MCAM axis maintaining perivascular cell fate). TINAGL1, C1QTNF1 and LGALSL are also characteristic perivascular/mural transcripts; LGI4/NFASC are peripheral-glia-associated peripheral members. High coherence, uniform expression (no foreign-lineage subset enrichment) indicates this is a bona fide mural sub-state within the SMC compartment rather than contamination. Neighboring modules (M7, M125, M31) carry complementary pericyte marker sets (COX4I2, HIGD1B, NDUFA4L2), supporting a mural-identity neighborhood.

Genes

C1QTNF1, EBF1, FRMD4A, FRY, ITGA7, LGALSL, LGI4, MCAM, MEF2C, NFASC, NOTCH3, NTN4, TINAGL1, ZBTB7C, ZFHX3

Most correlated modules

Module annotations were drafted by a large language model from the module's genes, then reviewed and approved by a domain expert. See sources & licences.