SCUBA

Lipid Xenobiotic Metabolism

Gene co-expression module in Colonocytes

CategoryNutrient metabolism
Genes0
Annotation certainty3 of 5
Annotation consistency14 of 24 genes have a known function matching the annotation

View this module in SCUBA

Why this annotation

Hub genes include CA12 (carbonic anhydrase/ion transport), SULT1A1/CYP4F12 (xenobiotic/sulfate metabolism), SLC27A4/ACAA1/ACOT8 (fatty acid transport and oxidation), PLCD1/PLCD3/PLD1/INPP5J (phospholipid signaling), and BSG (metabolic chaperone). The module is core coherent with mild sen_colono enrichment, representing lipid handling and xenobiotic detoxification in colonocytes. Phospholipid signaling genes co-occur with lipid metabolic genes, consistent with a colonocyte lipid/xenobiotic metabolism program.

Genes

Most correlated modules

Module annotations were drafted by a large language model from the module's genes, then reviewed and approved by a domain expert. See sources & licences.