SYF2 — SYF2 pre-mRNA splicing factor
SYF2 belongs to a gene co-expression module in 4 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.
SYF2's module in each cell type
| Cell type | Module | Shares the module with | |
|---|---|---|---|
| CD4⁺ T cells | Oxidative Phosphorylation Mitochondrial & OxPhos | ATP5F1E, BLOC1S1, COX5B, COX6A1, COX6C, COX8A, DYNLRB1, GMFG +6 more | View in SCUBA |
| Gamma-delta T cells | Chromatin-Splicing Regulation DNA/chromatin regulation | ANKRD11, BOD1L1, CAMLG, CEBPB, EAPP, FMR1, KMT2B, MED10 +13 more | |
| Innate lymphoid cells | RNA Splicing Processing RNA processing & translation | ATP5F1C, CHMP2A, CHMP4A, CYBA, DSTN, DYNC1I2, DYNLRB1, FKBP3 +16 more | View in SCUBA |
| Mucosal-associated invariant T cell | Vesicular Trafficking Housekeeping | ATP5PO, ATP6V1G1, CALM1, EEF1G, GET4, KLF2, MED10, MZT2B +5 more |
About the gene
| Synonyms | CBPIN, DKFZp564O2082, fSAP29, NTC31, p29 |
|---|---|
| Chromosome | 1: 25222276-25232502 |
| Predicted location | Intracellular |
| Essential gene | Yes |
| Protein class | Essential proteins, Predicted intracellular proteins |
| Biological process | mRNA processing, mRNA splicing |
Function
Involved in pre-mRNA splicing as component of the spliceosome.
Human Protein Atlas · Open Targets · UniProt
Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.