SCUBA

CEBPB — CCAAT enhancer binding protein beta

CEBPB belongs to a gene co-expression module in 10 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

CEBPB's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsImmediate early response
Stress
ABHD5, CITED2, FAM53C, GADD45A, GADD45B, HEXIM1, HSPA2, IER5L +9 moreView in SCUBA
CD8⁺ T cellsCytotoxic Gut Effector
cytotoxicity
ATP8B4, CCND2, CD63, CSF1, CTSA, GNLY, GNPTAB, GZMA +3 moreView in SCUBA
EndothelialEndothelial Chemokine Response
Chemotaxis
BMP2, CCL2, CEBPD, CNKSR3, CXCL1, CXCL2, CXCL3, CXCL8 +14 moreView in SCUBA
Gamma-delta T cellsChromatin-Splicing Regulation
DNA/chromatin regulation
ANKRD11, BOD1L1, CAMLG, EAPP, FMR1, KMT2B, MED10, MFSD14A +13 more
Innate lymphoid cellsmTOR Stress Response
Stress
DDIT3, DDIT4, GLS, ID1, IFRD1, INTS6, JMJD6, KLF4 +9 moreView in SCUBA
MacrophagesAutophagy Lysosomal Regulation
Lysosomal & pahgocytosis
ADIPOR1, ARL8A, ATOSB, BCL10, BROX, CCR1, CHMP2B, CHP1 +22 moreView in SCUBA
Natural Killer cellsNK Cell Exhaustion
Immune regulation
CEMIP2, DENND3, FMNL1, HAVCR2, IFNGR1, METRNL, PDE4D, PRNP +3 moreView in SCUBA
NeutrophilsNeutrophil Survival Program
Inflammatory
B2M, BCL2A1, EIF1, FTH1, FTL, H3-3A, H3-3B, PNRC1 +2 more
PericytesCytokine Inflammatory Response
Inflammatory
ADAMTS4, C11orf96, CEBPD, GEM, ID4, KCNE4, PHLDA1, RGS16 +4 moreView in SCUBA
Smooth muscle cellsGlucocorticoid Metallothionein Response
Stress
CEBPD, FKBP5, MT1E, MT1M, MT1X, MT2A, PNRC1, TSC22D1 +3 moreView in SCUBA

About the gene

SynonymsC/EBP-beta, CRP2, IL6DBP, LAP, NFIL6, TCF5
Chromosome20: 50190830-50192668
Predicted locationIntracellular
Essential geneNo
Protein classPredicted intracellular proteins, Transcription factors
Molecular functionActivator, DNA-binding
Biological processDifferentiation, Transcription, Transcription regulation

Function

Important transcription factor regulating the expression of genes involved in immune and inflammatory responses. Also plays a significant role in adipogenesis, as well as in the gluconeogenic pathway, liver regeneration, and hematopoiesis. The consensus recognition site is 5'-T[TG]NNGNAA[TG]-3'. Its functional capacity is governed by protein interactions and post-translational protein modifications. During early embryogenesis, plays essential and redundant roles with CEBPA. Has a promitotic effect on many cell types such as hepatocytes and adipocytes but has an antiproliferative effect on T-cells by repressing MYC expression, facilitating differentiation along the T-helper 2 lineage. Binds to regulatory regions of several acute-phase and cytokines genes and plays a role in the regulation of acute-phase reaction and inflammation. Also plays a role in intracellular bacteria killing (By similarity). During adipogenesis, is rapidly expressed and, after activation by phosphorylation, induces CEBPA and PPARG, which turn on the series of adipocyte genes that give rise to the adipocyte phenotype. The delayed transactivation of the CEBPA and PPARG genes by CEBPB appears necessary to allow mitotic clonal expansion and thereby progression of terminal differentiation. Essential for female reproduction because of a critical role in ovarian follicle development (By similarity). Restricts osteoclastogenesis: together with NFE2L1; represses expression of DSPP during odontoblast differentiation (By similarity). Essential for gene expression induction in activated macrophages. Plays a major role in immune responses such as CD4(+) T-cell response, granuloma formation and endotoxin shock. Not essential for intracellular bacteria killing. Acts as a dominant negative through heterodimerization with isoform 2. Promotes osteoblast differentiation and osteoclastogenesis (By similarity).

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.