SCUBA

AP-1 Early Activation

Gene co-expression module in CD8⁺ T cells

CategoryTCR Signaling
Genes14
Annotation certainty4 of 5
Annotation consistency10 of 14 genes have a known function matching the annotation

View this module in SCUBA

Why this annotation

The module is led by FOSB, JUNB, FOS — the canonical AP-1 immediate early gene triad — alongside BTG2, IER2, EGR1, NR4A2, and SOCS3, all classical immediate early response genes induced within minutes of TCR engagement or cellular stress. CD69 is the earliest surface marker of T cell activation, TNF is an early effector cytokine, MYADM is induced in activated myeloid/lymphoid cells, and TLE4 modulates AP-1/Wnt transcription. Together with neighbor M39 (also immediate early/NR4A1/JUN), this forms a coordinated AP-1/early activation response. The two modules likely represent slightly different time-points or intensity arms of the same immediate-early activation program. The presence of TNF and CD69 suggests this is true early activation rather than pure dissociation stress.

Genes

BTG2, CD69, EGR1, FOS, FOSB, IER2, JUNB, LEPROTL1, LITAF, MYADM, NR4A2, SOCS3, TLE4, TNF

Most correlated modules

Module annotations were drafted by a large language model from the module's genes, then reviewed and approved by a domain expert. See sources & licences.