SCUBA

CD69 — CD69 molecule

CD69 belongs to a gene co-expression module in 7 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

CD69's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsAP-1 Immediate Early
BCR/AP1/NFKb pathway
BTG2, CD83, DUSP1, EIF1, FOS, FOSB, JUN, JUNB +7 moreView in SCUBA
CD4⁺ T cellsImmediate Early AP-1
TCR/AP1/NFKb pathway
BTG2, CDKN1A, DUSP1, EGR1, FOS, FOSB, IER2, IER5 +6 moreView in SCUBA
CD8⁺ T cellsAP-1 Early Activation
TCR Signaling
BTG2, EGR1, FOS, FOSB, IER2, JUNB, LEPROTL1, LITAF +5 moreView in SCUBA
Gamma-delta T cellsTCR Early Activation
TCR Signaling
BTG1, BTG2, CIRBP, CXCR4, DUSP1, EIF1, ETV3, FOS +15 more
Goblet cellsNF-kB Inflammatory Signaling
chromatin regulation & transcription
CXCR4, DDX21, DUSP2, FOSL2, IRF1, NFKB2, REL, RGCC +5 moreView in SCUBA
Innate lymphoid cellsCytokine-driven Activation
activation
BIRC3, CALR, DUSP5, GADD45G, ISG15, NCOA7, PPIF, RUNX3 +2 moreView in SCUBA
Mucosal-associated invariant T cellT cell Activation
T cell maturation
BTG2, CCNL1, CD83, CHMP1B, CYCS, DNAAF2, DNAJA1, FOSB +7 more

About the gene

SynonymsCLEC2C
Chromosome12: 9752486-9760901
Predicted locationMembrane
Essential geneNo
Protein classCD markers, Predicted membrane proteins
Molecular functionReceptor

Function

Transmembrane protein expressed mainly on T-cells resident in mucosa that plays an essential role in immune cell homeostasis. Rapidly expressed on the surface of platelets, T-lymphocytes and NK cells upon activation by various stimuli, such as antigen recognition or cytokine signaling, stimulates different signaling pathways in different cell types. Negatively regulates Th17 cell differentiation through its carbohydrate dependent interaction with galectin-1/LGALS1 present on immature dendritic cells. Association of CD69 cytoplasmic tail with the JAK3/STAT5 signaling pathway regulates the transcription of RORgamma/RORC and, consequently, differentiation toward the Th17 lineage (By similarity). Also acts via the S100A8/S100A9 complex present on peripheral blood mononuclear cells to promote the conversion of naive CD4 T-cells into regulatory T-cells. Acts as an oxidized low-density lipoprotein (oxLDL) receptor in CD4 T- lymphocytes and negatively regulates the inflammatory response by inducing the expression of PDCD1 through the activation of NFAT. Participates in adipose tissue-derived mesenchymal stem cells (ASCs)-mediated protection against P.aeruginosa infection. Mechanistically, specifically recognizes P.aeruginosa to promote ERK1 activation, followed by granulocyte-macrophage colony-stimulating factor (GM-CSF) and other inflammatory cytokines secretion. In eosinophils, induces IL-10 production through the ERK1/2 pathway (By similarity). Negatively regulates the chemotactic responses of effector lymphocytes and dendritic cells (DCs) to sphingosine 1 phosphate/S1P by acting as a S1PR1 receptor agonist and facilitating the internalization and degradation of the receptor.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.