SCUBA

Endothelial NO Activation

Gene co-expression module in Endothelial

CategoryEndothelial cell development
Genes17
Annotation certainty3 of 5
Annotation consistency8 of 17 genes have a known function matching the annotation

View this module in SCUBA

Why this annotation

DDAH2 (dimethylarginine dimethylaminohydrolase 2) degrades ADMA, a competitive inhibitor of eNOS, thereby promoting NO production — a canonical endothelial activation marker. CREM (cAMP response element modulator) is a transcriptional regulator downstream of cAMP/PKA signaling in endothelial activation. CDH13 (T-cadherin/H-cadherin) is an endothelial-enriched adhesion molecule regulating vascular tone and angiogenesis. CD99 facilitates leukocyte transendothelial migration. STMN1 (stathmin) regulates microtubule dynamics during cell activation. VIM (vimentin) and TUBA1A (tubulin) are cytoskeletal components upregulated in activated endothelium. COX5A is a cytochrome c oxidase subunit (mitochondrial). BLOC1S1 is involved in lysosomal biogenesis. SMS (spermine synthase) regulates polyamine metabolism. PTTG1IP is involved in cell signaling. The module is significantly upregulated in IBD inflammation and reflects endothelial NO/cAMP activation signaling.

Genes

BCL6B, BLOC1S1, CD99, CDH13, COX5A, CREM, DDAH2, DDX46, EEA1, EIF5B, LSM7, PTTG1IP, SMS, STMN1, TUBA1A, TUSC3, VIM

Most correlated modules

Module annotations were drafted by a large language model from the module's genes, then reviewed and approved by a domain expert. See sources & licences.