SCUBA

EXOSC6 — Exosome component 6

EXOSC6 belongs to a gene co-expression module in 3 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

EXOSC6's module in each cell type

Cell typeModuleShares the module with
Gamma-delta T cellsER Proteotoxic Stress
Stress
ARL4A, BCAS2, CCDC59, CSRNP1, CYCS, EIF5, FOSB, HSPA5 +13 more
MacrophagesRNA Processing Housekeeping
Housekeeping
CISD3, CNIH4, DDX52, DPH3, FABP5, GTF2E2, IKBKE, LYSET +20 moreView in SCUBA
Mucosal-associated invariant T cellmRNA Decay Program
RNA processing & translation
ATP6V0C, BCL7B, BTG1, BTG3, CCDC59, DDIT4, DUSP2, DYNLL2 +13 more

About the gene

SynonymsEAP4, hMtr3p, MTR3, Mtr3p, p11
Chromosome16: 70246778-70251940
Predicted locationIntracellular
Essential geneYes
Protein classEssential proteins, Predicted intracellular proteins
Molecular functionRNA-binding
Biological processrRNA processing

Function

Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. The RNA exosome may be involved in Ig class switch recombination (CSR) and/or Ig variable region somatic hypermutation (SHM) by targeting AICDA deamination activity to transcribed dsDNA substrates. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. The catalytic inactive RNA exosome core complex of 9 subunits (Exo-9) is proposed to play a pivotal role in the binding and presentation of RNA for ribonucleolysis, and to serve as a scaffold for the association with catalytic subunits and accessory proteins or complexes

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.