SCUBA

EXOSC8 — Exosome component 8

EXOSC8 belongs to a gene co-expression module in 3 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

EXOSC8's module in each cell type

Cell typeModuleShares the module with
Gamma-delta T cellsInterferon Stimulated Response
Inflammation
AK3, AP2A1, CTNNBL1, CYB5R3, DRG2, EPSTI1, GPANK1, GUSB +6 more
Goblet cellsS/G2 Preparation
Cell cycle
DTYMK, HMGN2, LMNB1, LSM3, LSM5, MIS18A, MIS18BP1, SMC2 +4 moreView in SCUBA
MacrophagesReplication Chromatin Assembly
Cell cycle
ANP32B, CBX3, CDK4, COPS3, DEK, DNMT1, EMC8, FDPS +22 moreView in SCUBA

About the gene

SynonymsbA421P11.3, CIP3, EAP2, OIP2, p9, RRP43, Rrp43p
Chromosome13: 36998816-37025881
Predicted locationIntracellular
Essential geneYes
Protein classDisease related genes, Essential proteins, Human disease related genes, Predicted intracellular proteins
Molecular functionRNA-binding
Biological processrRNA processing

Function

Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. The RNA exosome may be involved in Ig class switch recombination (CSR) and/or Ig variable region somatic hypermutation (SHM) by targeting AICDA deamination activity to transcribed dsDNA substrates. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. The catalytic inactive RNA exosome core complex of 9 subunits (Exo-9) is proposed to play a pivotal role in the binding and presentation of RNA for ribonucleolysis, and to serve as a scaffold for the association with catalytic subunits and accessory proteins or complexes. EXOSC8 binds to ARE-containing RNAs.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.