SCUBA

FDPS — Farnesyl diphosphate synthase

FDPS belongs to a gene co-expression module in 10 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

FDPS's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsRNA Processing
RNA processing
ANP32A, CCDC167, CDK4, CENPX, CYC1, GGCT, LSM3, LSM4 +14 moreView in SCUBA
CD4⁺ T cellsOxidative Phosphorylation
Mitochondrial & OxPhos
AP2S1, ATP5F1C, ATP5PF, COPS9, COX6B1, EID1, FAM89B, FIS1 +19 moreView in SCUBA
CD8⁺ T cellsCellular Housekeeping
Housekeeping
ACAT2, ACOT7, CISD2, NUDT21, PA2G4, PPIA, PSMC3, PSMG2 +9 moreView in SCUBA
EndothelialHippo-YAP Cytoskeletal
Cytoskeletal
CSRP1, EHD2, FLNA, FLNB, MANSC1, MAP1B, MSRB3, MTCH1 +4 moreView in SCUBA
Gamma-delta T cellsCellular Homeostasis
Housekeeping
ANAPC11, BANF1, CALM3, CBX3, CBX5, COMMD4, DPM2, DUT +21 more
Goblet cellsSterol Biosynthesis
Housekeeping
ACAT2, CKLF, COPS9, DHCR24, EBP, PLP2, TXNDC17View in SCUBA
Innate lymphoid cellsLipid & Isoprenoid Metabolism
Metabolism
ARL6IP1, CHCHD5, ECH1, GTF2H5, LYPLA1, NECAP2, NUBP2, OCIAD2 +8 moreView in SCUBA
Lymphatic endothelialLymphatic EC Identity
endothelial development
ATP6AP2, BEX3, CD151, GNG11, LMO2, MGST3, NAA38, POLR2L +2 moreView in SCUBA
MacrophagesReplication Chromatin Assembly
Cell cycle
ANP32B, CBX3, CDK4, COPS3, DEK, DNMT1, EMC8, EXOSC8 +22 moreView in SCUBA
PericytesG-protein Signaling Scaffold
Housekeeping
BCAP29, GNB1, GNB2, PPIA, RAC1, RAP1A, TRIR, YWHAB +1 moreView in SCUBA

About the gene

Chromosome1: 155308748-155320666
Predicted locationIntracellular
Essential geneYes
Protein classDisease related genes, Enzymes, Essential proteins, FDA approved drug targets, Human disease related genes, Metabolic proteins, Plasma proteins, Predicted intracellular proteins
Molecular functionTransferase
Biological processCholesterol biosynthesis, Cholesterol metabolism, Host-virus interaction, Isoprene biosynthesis, Lipid biosynthesis, Lipid metabolism, Steroid biosynthesis, Steroid metabolism, Sterol biosynthesis, Sterol metabolism

Function

Key enzyme in isoprenoid biosynthesis which catalyzes the formation of farnesyl diphosphate (FPP), a precursor for several classes of essential metabolites including sterols, dolichols, carotenoids, and ubiquinones. FPP also serves as substrate for protein farnesylation and geranylgeranylation. Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.