SCUBA

Pericyte Identity Differentiation

Gene co-expression module in Pericytes

CategoryDevelopmental
Genes20
Annotation certainty3 of 5
Annotation consistency9 of 20 genes have a known function matching the annotation

View this module in SCUBA

Why this annotation

NR2F2 (COUP-TFII) is a master transcription factor for pericyte/mural cell identity and venous specification. ZEB2 is an EMT/mesenchymal transcription factor expressed in pericytes. GUCY1A1 (sGC alpha1, NO signaling), SYNPO2 and LMOD1 (smooth muscle cytoskeletal), ADAMTS5 (ECM protease), NFASC (neurofascin, cell adhesion), ARHGAP15 (Rho GAP), RERG (Ras-related GTPase), INPP4B (PI signaling), and PLPPR4 (lipid phosphatase) together define a pericyte differentiation/identity program with ECM remodeling capacity. The moderate inflammation upregulation suggests this program is modulated but not primarily inflammatory.

Genes

ADAMTS5, ARHGAP15, EPB41L2, GUCY1A1, INPP4B, LGI4, LMOD1, MAP1LC3A, NFASC, NR2F2, PLEKHH2, PLPPR4, RALGPS2, REM1, RERG, SLC38A2, STEAP4, SYNPO2, SYTL2, ZEB2

Most correlated modules

Module annotations were drafted by a large language model from the module's genes, then reviewed and approved by a domain expert. See sources & licences.