SCUBA

IFIT2 — Interferon induced protein with tetratricopeptide repeats 2

IFIT2 belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

IFIT2's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsCytotoxic Effector CD4
Cytotoxicity
ADAM8, ADRB2, CCL5, CHD9, DPP4, HIC1, HOPX, ITGA1 +13 moreView in SCUBA
EndothelialType I Interferon
Inflammation
CMPK2, HELZ2, IFI44, IFI44L, IFI6, IFIT1, IFIT3, IFIT5 +9 moreView in SCUBA
FibroblastsType I Interferon
Inflammatory
APOL6, BATF2, CXCL10, GBP1, IFI44L, IFIT3, ISG15, MX1 +6 moreView in SCUBA
Gamma-delta T cellsNK-like Mature gd-T
cytotoxicity
ABHD2, ATG9A, CEP78, HAVCR2, HSH2D, ITGAX, KIR2DL1, KIR2DL3 +14 more
Lymphatic endothelialType I Interferon
Inflammation
BST2, CD74, CLEC14A, HLA-DRA, HLA-DRB1, IFI6, IFIT1, IFIT3 +4 moreView in SCUBA
MacrophagesType I Interferon
Antiviral
CCL8, CMPK2, HELZ2, IFI27, IFI44, IFI44L, IFI6, IFIT1 +13 moreView in SCUBA
MonocytesType I Interferon
Antiviral
CMPK2, DEFB1, HERC5, IFIT1, IFIT3, OASL, OPTN, RSAD2 +1 moreView in SCUBA
NeutrophilsIFN-gamma Response
Antiviral
CARD16, CCR1, FFAR2, GBP1, GBP5, IFIT3, IFITM3, IRF1 +4 more
Smooth muscle cellsType I Interferon
Inflammation
BST2, GBP4, HLA-F, IFI6, IFITM1, ISG15, LY6E, PSMB8 +3 moreView in SCUBA

About the gene

Synonymscig42, G10P2, GARG-39, IFI-54, IFI54, ISG-54, ISG-54K
Chromosome10: 89283694-89309271
Predicted locationIntracellular
Essential geneNo
Protein classPredicted intracellular proteins
Molecular functionRNA-binding
Biological processAntiviral defense, Apoptosis, Immunity, Innate immunity

Function

IFN-induced antiviral protein which inhibits expression of viral messenger RNAs lacking 2'-O-methylation of the 5' cap. The ribose 2'-O-methylation would provide a molecular signature to distinguish between self and non-self mRNAs by the host during viral infection. Viruses evolved several ways to evade this restriction system such as encoding their own 2'-O-methylase for their mRNAs or by stealing host cap containing the 2'-O-methylation (cap snatching mechanism). Binds AU-rich viral RNAs, with or without 5' triphosphorylation, RNA-binding is required for antiviral activity. Can promote apoptosis

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.