SCUBA

BST2 — Bone marrow stromal cell antigen 2

BST2 belongs to a gene co-expression module in 13 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

BST2's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsInterferon-stimulated genes
Anti-viral
APOBEC3G, ARPC4, ARPC5L, BAK1, DCTN3, ECH1, ETFB, FAM104A +14 moreView in SCUBA
CD8⁺ T cellsType I Interferon
Inflammation
CHMP5, EIF2AK2, LAP3, NAPA, NMI, OASL, PLSCR1, SPATS2L +1 moreView in SCUBA
EndothelialMHC Class I Presentation
Inflammation
B2M, BTN3A1, BTN3A2, CYSTM1, HLA-A, HLA-B, HLA-C, HLA-F +1 moreView in SCUBA
FibroblastsImmunoproteasome MHC-I
Inflammatory
B2M, EPSTI1, HLA-A, HLA-B, HLA-C, HLA-F, IFI27, PPA1 +7 moreView in SCUBA
Gamma-delta T cellsProteostasis/Chaperonin
Protein processing & ER
CARD16, CBR1, CCT3, CCT6A, DOK2, DYNLL1, HIKESHI, ME2 +13 more
Hematopoietic progenitor cellsInterferon Stimulated
Inflammatory
EGFL7, IFITM3, LKAAEAR1, MGST3, NPDC1, PRDX1, VAMP5
Innate lymphoid cellsInnate Inflammatory Activation
Inflammation
ARL6IP5, CD2, CD63, FTL, HMGB1, ITM2B, MGST3, MTDH +7 moreView in SCUBA
Lymphatic endothelialType I Interferon
Inflammation
CD74, CLEC14A, HLA-DRA, HLA-DRB1, IFI6, IFIT1, IFIT2, IFIT3 +4 moreView in SCUBA
MacrophagesInnate Antiviral Sensing
Innate immunity
ADA2, ADPRH, ALDH9A1, APOBEC3C, C2, CAT, CD4, CHID1 +26 moreView in SCUBA
MonocytesInflammasome Activation
Innate immunity
AIM2, APOBEC3G, ARID5B, BATF3, CASP5, CD47, CNDP2, CYSTM1 +4 moreView in SCUBA
Mucosal-associated invariant T cellType I Interferon
Inflammation
ABCF2, ACAA2, ANXA2R, CHST12, IRF9, LY6E, LYSMD2, NDUFC2 +6 more
Natural Killer cellsNK Inflammatory Activation
Inflammation
CCT4, FCER1G, FGFR1OP2, ITM2B, LPIN2, LPXN, MBNL1, PTGES3 +1 moreView in SCUBA
Smooth muscle cellsType I Interferon
Inflammation
GBP4, HLA-F, IFI6, IFIT2, IFITM1, ISG15, LY6E, PSMB8 +3 moreView in SCUBA

About the gene

SynonymsBST-2, CD317, HM1.24, tetherin
Chromosome19: 17402939-17405630
Predicted locationMembrane
Essential geneNo
Protein classCD markers, Plasma proteins, Predicted membrane proteins, Transporters
Biological processAntiviral defense, B-cell activation, Host-virus interaction, Immunity, Innate immunity

Function

IFN-induced antiviral host restriction factor which efficiently blocks the release of diverse mammalian enveloped viruses by directly tethering nascent virions to the membranes of infected cells. Acts as a direct physical tether, holding virions to the cell membrane and linking virions to each other. The tethered virions can be internalized by endocytosis and subsequently degraded or they can remain on the cell surface. In either case, their spread as cell-free virions is restricted. Its target viruses belong to diverse families, including retroviridae: human immunodeficiency virus type 1 (HIV-1), human immunodeficiency virus type 2 (HIV-2), simian immunodeficiency viruses (SIVs), equine infectious anemia virus (EIAV), feline immunodeficiency virus (FIV), prototype foamy virus (PFV), Mason-Pfizer monkey virus (MPMV), human T-cell leukemia virus type 1 (HTLV-1), Rous sarcoma virus (RSV) and murine leukemia virus (MLV), flavivirideae: hepatitis C virus (HCV), filoviridae: ebola virus (EBOV) and marburg virus (MARV), arenaviridae: lassa virus (LASV) and machupo virus (MACV), herpesviridae: kaposis sarcoma-associated herpesvirus (KSHV), rhabdoviridae: vesicular stomatitis virus (VSV), orthomyxoviridae: influenza A virus, paramyxoviridae: nipah virus, and coronaviridae: SARS-CoV. Can inhibit cell surface proteolytic activity of MMP14 causing decreased activation of MMP15 which results in inhibition of cell growth and migration. Can stimulate signaling by LILRA4/ILT7 and consequently provide negative feedback to the production of IFN by plasmacytoid dendritic cells in response to viral infection. Plays a role in the organization of the subapical actin cytoskeleton in polarized epithelial cells. Isoform 1 and isoform 2 are both effective viral restriction factors but have differing antiviral and signaling activities. Isoform 2 is resistant to HIV-1 Vpu-mediated degradation and restricts HIV-1 viral budding in the presence of Vpu. Isoform 1 acts as an activator of NF-kappa-B and this activity is inhibited by isoform 2.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.