SCUBA

CD74 — CD74 molecule

CD74 belongs to a gene co-expression module in 16 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

CD74's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsMHC-II antigen presentation
B cell maturation
ARID5A, CD52, CD79A, CTSS, CYBA, HLA-DPA1, HLA-DPB1, HLA-DQA1 +9 moreView in SCUBA
CD4⁺ T cellsMHC-II antigen presentation
Immune regulation
CDCA7, CHN1, FABP5, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQB1, HLA-DRA +3 moreView in SCUBA
CD8⁺ T cellsMHC Class II Presentation
Immune regulation
COTL1, HLA-DMA, HLA-DMB, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQB1, HLA-DRA +3 moreView in SCUBA
EndothelialMHC Class II Presentation
Inflammation
CIITA, CST3, GSTK1, HLA-DMA, HLA-DMB, HLA-DOA, HLA-DPA1, HLA-DPB1 +7 moreView in SCUBA
EnterocytesMHC antigen presentation
Inflammation
B2M, GSDMB, HLA-A, HLA-B, HLA-C, HLA-DMB, HLA-DPA1, HLA-DPB1 +7 moreView in SCUBA
FibroblastsIFN-γ MHC-II Response
Inflammatory
CALHM6, CXCL11, CXCL9, GBP4, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DRA +3 moreView in SCUBA
Gamma-delta T cellsMHC-II Antigen Presentation
Immune regulation
HLA-DMA, HLA-DMB, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DRA +3 more
Glial cellsMHC-II Antigen Presentation
Inflammation
C2, CIITA, HLA-DMA, HLA-DMB, HLA-DOA, HLA-DPA1, HLA-DPB1, HLA-DQA1 +3 moreView in SCUBA
Goblet cellsMHC Class II Antigen Presentation
Immune function
C2, HLA-DMA, HLA-DPA1, HLA-DPB1, HLA-DQB1, HLA-DRA, HLA-DRB1, HLA-DRB5 +2 moreView in SCUBA
Hematopoietic progenitor cellsMHC-II Antigen Presentation
Myeloid development
GSTP1, HLA-DOA, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQB1, HLA-DRA, HLA-DRB1 +1 more
Innate lymphoid cellsGlycolysis & OxPhos
Metabolism
ANXA7, ARF3, ATP5MC3, CD320, CNBP, COX6A1, COX6B1, IL2RG +10 moreView in SCUBA
Lymphatic endothelialType I Interferon
Inflammation
BST2, CLEC14A, HLA-DRA, HLA-DRB1, IFI6, IFIT1, IFIT2, IFIT3 +4 moreView in SCUBA
MacrophagesMHC-II Antigen Presentation
Innate immunity
AIF1, B2M, C1QA, C1QB, C1QC, CD68, CST3, CTSC +19 moreView in SCUBA
MonocytesMHC II Antigen Presentation
Innate immunity
ARHGEF10L, CD4, HLA-DQA2, HLA-DRB5, RASA4, RTN1, SASH1, SETDB2View in SCUBA
PericytesMHC-II Antigen Presentation
Inflammatory
CIITA, CYYR1, FLI1, HLA-DMA, HLA-DMB, HLA-DPA1, HLA-DPB1, HLA-DQB1 +4 moreView in SCUBA
Smooth muscle cellsBMP-antagonist Niche
Development
AP1S2, ARL4C, C3, CCBE1, CHRDL1, CISD1, GREM1, GREM2 +4 moreView in SCUBA

About the gene

SynonymsCLIP, DHLAG
Chromosome5: 150401637-150412969
Predicted locationMembrane, Secreted
Essential geneNo
Protein classCancer-related genes, CD markers, Disease related genes, Potential drug targets, Predicted membrane proteins, Predicted secreted proteins, Transporters
Molecular functionChaperone
Biological processAdaptive immunity, Immunity

Function

Plays a critical role in MHC class II antigen processing by stabilizing peptide-free class II alpha/beta heterodimers in a complex soon after their synthesis and directing transport of the complex from the endoplasmic reticulum to the endosomal/lysosomal system where the antigen processing and binding of antigenic peptides to MHC class II takes place. Serves as cell surface receptor for the cytokine MIF. Binds to the peptide-binding site of MHC class II alpha/beta heterodimers forming an alpha-beta-CLIP complex, thereby preventing the loading of antigenic peptides to the MHC class II complex until its release by HLA-DM in the endosome. Stabilizes the conformation of mature CTSL by binding to its active site and serving as a chaperone to help maintain a pool of mature enzyme in endocytic compartments and extracellular space of antigen-presenting cells (APCs). Has antiviral activity by stymieing the endosomal entry of Ebola virus and coronaviruses, including SARS-CoV-2. Disrupts cathepsin-mediated Ebola virus glycoprotein processing, which prevents viral fusion and entry. This antiviral activity is specific to p41 isoform.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.