SCUBA

IFI6 — Interferon alpha inducible protein 6

IFI6 belongs to a gene co-expression module in 12 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

IFI6's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsActivated Treg
Immune regulation
ACOT9, AHSP, AKIP1, BASP1, CASP1, CCR8, CD177, CSF2RB +13 moreView in SCUBA
CD8⁺ T cellsType I Interferon
Inflammation
EPSTI1, IFI35, IFI44, IFI44L, IRF7, ISG15, LGALS9, MX1 +3 moreView in SCUBA
EndothelialType I Interferon
Inflammation
CMPK2, HELZ2, IFI44, IFI44L, IFIT1, IFIT2, IFIT3, IFIT5 +9 moreView in SCUBA
FibroblastsInterferon Response
Inflammatory
A4GALT, ABCA1, ABHD17C, BASP1, CCL7, CLEC2B, IFI16, PLSCR1 +5 moreView in SCUBA
Glial cellsType I/II Interferon Response
Inflammation
GBP2, HLA-F, IFIT3, ISG15, LY6E, PSMB8, PSMB9, PSME1 +6 moreView in SCUBA
Goblet cellsSecreted Antimicrobials
Immune function
FAM3D, IGFBP2, KLK11, KLK12, NBL1, NOXO1, PCSK1, REG1A +6 moreView in SCUBA
Lymphatic endothelialType I Interferon
Inflammation
BST2, CD74, CLEC14A, HLA-DRA, HLA-DRB1, IFIT1, IFIT2, IFIT3 +4 moreView in SCUBA
MacrophagesType I Interferon
Antiviral
CCL8, CMPK2, HELZ2, IFI27, IFI44, IFI44L, IFIT1, IFIT2 +13 moreView in SCUBA
MonocytesType I Interferon Response
Antiviral
EPSTI1, IFI44, IFI44L, IRF7, MX1, OAS2, OAS3, PARP12 +1 moreView in SCUBA
Mucosal-associated invariant T cellType I Interferon
Inflammation
DDX60, DDX60L, DTX3L, EIF2AK2, EPSTI1, GBP2, GBP4, HERC5 +18 more
PericytesType I Interferon
Inflammatory
IFI16, IFI44L, MX1, PPIC, RCN1, SP100, TNFRSF1A, XAF1View in SCUBA
Smooth muscle cellsType I Interferon
Inflammation
BST2, GBP4, HLA-F, IFIT2, IFITM1, ISG15, LY6E, PSMB8 +3 moreView in SCUBA

About the gene

Synonyms6-16, FAM14C, G1P3, IFI-6-16, IFI616
Chromosome1: 27666064-27672212
Predicted locationMembrane
Essential geneNo
Protein classPredicted membrane proteins
Biological processAntiviral defense, Apoptosis, Immunity, Innate immunity

Function

Interferon-stimulated protein that plays an important role in innate immune response against a wide variety of viruses. Inhibits flavivirus replication by preventing the formation of virus-induced endoplasmic reticulum membrane invaginations, which are double-membrane vesicles that flaviviruses use for their replication. Has an antiviral activity towards hepatitis C virus/HCV by inhibiting the EGFR signaling pathway, whose activation is required for entry of the virus into cells. Within the nucleus, restricts hepatitis B virus/HBV promoter activity leading to substantial reduction of viral replication and gene expression. Plays a role in apoptosis, negatively regulating the intrinsinc apoptotic signaling pathway and TNFSF10-induced apoptosis. However, it has also been shown to have a pro- apoptotic activity. Modulates innate immune response mediated by RIGI by preventing its activation.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.