SCUBA

CXCR4 — C-X-C motif chemokine receptor 4

CXCR4 belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

CXCR4's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsB cell quiescence
BCR/AP1/NFKb pathway
AREG, BTG1, CD55, LY9, PNRC1, TUBA1A, YPEL5, ZFP36L2View in SCUBA
CD4⁺ T cellsImmediate early activation
TCR/AP1/NFKb pathway
ALG13, AREG, BCAS2, C9orf72, FAM222A, HIP1R, NR4A2, PABPC1 +18 moreView in SCUBA
EndothelialCXCL12 Angiogenic Chemotaxis
Chemotaxis
ACKR3, AFAP1L1, ARHGAP18, ARHGEF7, CHST1, FHL3, FSCN1, GABRE +15 moreView in SCUBA
FibroblastsFibroblast Niche Identity
Developmental
ALKAL2, AMPD3, CHST1, CNTFR, COL4A6, CTTNBP2, DDHD1, EDAR +10 moreView in SCUBA
Gamma-delta T cellsTCR Early Activation
TCR Signaling
BTG1, BTG2, CD69, CIRBP, DUSP1, EIF1, ETV3, FOS +15 more
Goblet cellsNF-kB Inflammatory Signaling
chromatin regulation & transcription
CD69, DDX21, DUSP2, FOSL2, IRF1, NFKB2, REL, RGCC +5 moreView in SCUBA
Innate lymphoid cellsNK ILC Tissue Homing
Homing & TEM
ADGRE5, AKAP13, AREG, ARL4C, ATP1B3, B3GNT7, BTG1, CCDC107 +25 moreView in SCUBA
Mucosal-associated invariant T cellNF-κB Negative Feedback
Immune regulation
ARL4A, BCAS2, CSRNP1, ENSG00000285976, IDS, ITPRIP, NFKBIA, NFKBIB +7 more
Natural Killer cellsAP-1 Immediate Early
activation
BTG1, CITED2, DUSP1, DUSP2, FOS, JUN, JUNB, KLF6 +1 moreView in SCUBA

About the gene

SynonymsCD184, D2S201E, fusin, HM89, HSY3RR, LESTR, NPY3R, NPYR, NPYY3R
Chromosome2: 136114349-136119177
Predicted locationMembrane
Essential geneNo
Protein classCancer-related genes, CD markers, Disease related genes, FDA approved drug targets, G-protein coupled receptors, Human disease related genes, Predicted membrane proteins, Transporters
Molecular functionG-protein coupled receptor, Host cell receptor for virus entry, Receptor, Transducer
Biological processHost-virus interaction

Function

Receptor for the C-X-C chemokine CXCL12/SDF-1 that transduces a signal by increasing intracellular calcium ion levels and enhancing MAPK1/MAPK3 activation. Involved in the AKT signaling cascade. Plays a role in regulation of cell migration, e.g. during wound healing. Acts as a receptor for extracellular ubiquitin; leading to enhanced intracellular calcium ions and reduced cellular cAMP levels. Binds bacterial lipopolysaccharide (LPS) et mediates LPS-induced inflammatory response, including TNF secretion by monocytes. Involved in hematopoiesis and in cardiac ventricular septum formation. Also plays an essential role in vascularization of the gastrointestinal tract, probably by regulating vascular branching and/or remodeling processes in endothelial cells. Involved in cerebellar development. In the CNS, could mediate hippocampal-neuron survival (By similarity). (Microbial infection) Acts as a coreceptor (CD4 being the primary receptor) for human immunodeficiency virus-1/HIV-1 X4 isolates and as a primary receptor for some HIV-2 isolates. Promotes Env- mediated fusion of the virus.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.