SCUBA

COPE — COPI coat complex subunit epsilon

COPE belongs to a gene co-expression module in 8 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

COPE's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsOxidative Phosphorylation
Mitochondrial & OxPhos
ANAPC11, AP2S1, ATP5F1A, ATP5F1C, COX8A, GAPDH, GNG5, NDUFB10 +7 moreView in SCUBA
CD4⁺ T cellsActin cytoskeleton
Cytoskeletal
ACTB, ACTG1, ARPC2, ARPC3, CLIC1, ELOB, GAPDH, PFN1 +3 moreView in SCUBA
CD8⁺ T cellsER-Golgi Trafficking
Protein processing & ER
BLOC1S1, CLIC1, COPZ1, FIBP, IFI27L2, MYL6, RAP1B, SURF4 +1 moreView in SCUBA
EndothelialGlycolysis Activation
Housekeeping
ATP5F1B, BSG, CCT7, FKBP3, GAPDH, ISOC2, KDELR2, P4HB +8 moreView in SCUBA
FibroblastsER-Golgi Trafficking
Vesicular traficking
ARL1, CALR, DNAJC3, EMC7, GDI2, MPG, MYDGF, PDIA6 +6 moreView in SCUBA
Gamma-delta T cellsOxidative Phosphorylation
Mitochondrial & OxPhos
ARPC1B, ARPC4, ATP6V1F, COX6A1, COX6B1, COX6C, CSNK2B, NDUFA1 +12 more
Innate lymphoid cellsProteasome & COPI Trafficking
Protein processing & ER
CCT8, COPZ1, COX5A, FIBP, GPX4, LAMTOR4, MDH1, NDUFC2 +5 moreView in SCUBA
MacrophagesProteasome UPS
Housekeeping
ACP1, ARPC5L, ATP6V1G1, AURKAIP1, C19orf53, CHMP2A, CIAO2B, CIB1 +31 moreView in SCUBA

About the gene

Synonymsepsilon-COP
Chromosome19: 18899514-18919387
Predicted locationIntracellular
Essential geneYes
Protein classEssential proteins, Metabolic proteins, Predicted intracellular proteins
Biological processER-Golgi transport, Protein transport, Transport

Function

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated with ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors (By similarity)

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.