SCUBA

SPN — Sialophorin

SPN belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

SPN's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsTh17 effector
Th17 fate
CD6, CLSTN3, CTDSP1, IL17A, ITPRIPL2, MAP3K4, MPRIP, NFIL3 +6 moreView in SCUBA
Gamma-delta T cellsButyrophilin gd Activation
TCR Signaling
ABI1, ADD3, ANXA6, ARHGAP1, ARHGAP25, ARHGAP30, ARHGEF2, BTN3A1 +16 more
Hematopoietic progenitor cellsHSC Progenitor Proliferation
Stemness
AMD1, CDK6, GNAQ, GSE1, MYB, RNF24, STAT5A, ZEB2
Innate lymphoid cellsCentrosome & Scaffolding
Cytoskeleton & motility
AKAP9, APPL1, ARID4A, CCDC91, CPNE3, ETNK1, FAM204A, GOPC +14 moreView in SCUBA
MacrophagesSPP1 Tissue Remodeling
ECM remodeling
BST1, CD52, CHI3L1, CHIT1, CSF1, FBP1, FGR, FN1 +19 moreView in SCUBA
MonocytesNon-classical Monocyte
Innate immunity
CD79B, CDH23, CDKN1C, CHST7, CKB, CYFIP2, KNDC1, LYPD2 +6 moreView in SCUBA
Mucosal-associated invariant T cellActin Cytoskeletal Remodeling
Cytoskeletal
ANXA6, CAP1, CASP1, CCT5, CCT6A, DEF6, FGD3, GIMAP6 +7 more
Natural Killer cellsNK Homing Adhesion
Homing & TEM
CHST2, IGFBP7, ITGAM, LAIR1, MLC1, MYOM2, NCR3View in SCUBA
NeutrophilsPrimary Granule Antimicrobial
Degranulation
CEACAM6, DEFA3, DEFA4, DUT, HNRNPAB, MS4A3, NUCB2, RNASE2 +1 more

About the gene

SynonymsCD43, GPL115, LEU-22, LSN
Chromosome16: 29662979-29670876
Predicted locationMembrane
Essential geneNo
Protein classCD markers, Predicted membrane proteins

Function

Predominant cell surface sialoprotein of leukocytes which regulates multiple T-cell functions, including T-cell activation, proliferation, differentiation, trafficking and migration. Positively regulates T-cell trafficking to lymph-nodes via its association with ERM proteins (EZR, RDX and MSN) (By similarity). Negatively regulates Th2 cell differentiation and predisposes the differentiation of T-cells towards a Th1 lineage commitment. Promotes the expression of IFN-gamma by T-cells during T-cell receptor (TCR) activation of naive cells and induces the expression of IFN-gamma by CD4(+) T-cells and to a lesser extent by CD8(+) T-cells. Plays a role in preparing T-cells for cytokine sensing and differentiation into effector cells by inducing the expression of cytokine receptors IFNGR and IL4R, promoting IFNGR and IL4R signaling and by mediating the clustering of IFNGR with TCR. Acts as a major E-selectin ligand responsible for Th17 cell rolling on activated vasculature and recruitment during inflammation. Mediates Th17 cells, but not Th1 cells, adhesion to E- selectin. Acts as a T-cell counter-receptor for SIGLEC1 (By similarity). Protects cells from apoptotic signals, promoting cell survival

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.