SCUBA

AMD1 — Adenosylmethionine decarboxylase 1

AMD1 belongs to a gene co-expression module in 11 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

AMD1's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsIntegrated Stress Response
Stress
DDIT3, FAM133B, GOLGB1, IFRD1, MIDN, MKNK2, PHF1, PIM2 +4 moreView in SCUBA
CD4⁺ T cellsRNA processing
RNA processing
AARSD1, ABHD14A, CALM2, CDKN2AIP, CHMP1B, FRAT1, HNRNPAB, HNRNPDL +7 moreView in SCUBA
EndothelialEndothelial Quiescence
Endothelial cell development
AQP7, ARMH4, CDC14B, FBXO34, GATA2, GLUL, KLF3, MTURN +7 moreView in SCUBA
Gamma-delta T cellsHeat Stress Apoptotic
Stress
DBF4, DNAJB9, DUSP2, IER5, NFKBIB, NINJ1, PHLDA1, PMAIP1 +5 more
Glial cellsHypoxia mTOR Stress
Stress
CDKN2AIP, CITED2, DDIT4, HEXIM1, HSPA2, IFRD1, INTS6, NEU1 +3 moreView in SCUBA
Hematopoietic progenitor cellsHSC Progenitor Proliferation
Stemness
CDK6, GNAQ, GSE1, MYB, RNF24, SPN, STAT5A, ZEB2
Innate lymphoid cellsIntegrated Stress Response
Stress
ATF4, CYCS, DDX5, DNAJB6, EIF1, GPBP1, HERPUD1, HNRNPH1 +3 moreView in SCUBA
Lymphatic endothelialStress Granule Assembly
Stress
BHLHE40, CD55, CDKN1A, DDX3X, DUSP5, EIF4G2, ERF, FUS +3 moreView in SCUBA
MacrophagesGeneral Cellular Maintenance
Housekeeping
ABHD13, AKT2, C1GALT1, DCUN1D1, FBXL3, FMR1, GAK, GCC2 +13 moreView in SCUBA
Mucosal-associated invariant T cellAP-1 Immediate Early
Stress
BRD2, CITED2, CSKMT, FUS, GADD45B, GADD45G, H2AX, HEXIM1 +17 more
Natural Killer cellsEGR2/3 NK Activation
activation
CHD4, CRTAM, CSF2, DNAJB9, EGR2, EGR3, GADD45A, MAP2K3 +4 moreView in SCUBA

About the gene

SynonymsSAMDC
Chromosome6: 110874770-110898879
Predicted locationIntracellular
Essential geneNo
Protein classEnzymes, Metabolic proteins, Predicted intracellular proteins
Molecular functionDecarboxylase, Lyase
Biological processPolyamine biosynthesis, Spermidine biosynthesis

Function

Essential for biosynthesis of the polyamines spermidine and spermine. Promotes maintenance and self-renewal of embryonic stem cells, by maintaining spermine levels

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.