SCUBA

CCL20 — C-C motif chemokine ligand 20

CCL20 belongs to a gene co-expression module in 8 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

CCL20's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsTh17/MAIT type-17
Th17 fate
AKT1S1, CA10, CA2, CEBPD, GFPT2, IL22, IL4I1, LRRN3 +9 moreView in SCUBA
CD8⁺ T cellsTc17 Survival Program
Tc17 program
DDX5, IRF1, MAF, MCL1, SAT1, TNFAIP3, TNFRSF4View in SCUBA
EnterocytesNF-kB epithelial activation
Inflammation
BNIP5, EHD4, HPS5, IL6ST, NFKBIA, RAB8B, RAP1B, TMPRSS2 +1 moreView in SCUBA
Innate lymphoid cellsILC1 Inflammatory Activation
Inflammation
ABHD15, ALDOC, ARL2BP, C20orf204, CPNE7, EIPR1, ERG28, ERGIC2 +21 moreView in SCUBA
MacrophagesNF-κB Inflammatory Activation
Inflammatory
ADM, CCL2, CCL7, CLEC4E, CXCL1, CXCL2, CXCL3, CXCL5 +19 moreView in SCUBA
MonocytesNLRP3 Inflammasome Activation
Innate immunity
ACSL1, BASP1, CCDC71L, EREG, F3, FAM107B, LRG1, NLRP3 +3 moreView in SCUBA
Mucosal-associated invariant T cellNF-κB Effector Activation
Inflammation
ADGRE5, BCL2A1, CCL3, CCL3L3, CCL4, CCL4L2, DUSP10, EGR2 +10 more
NeutrophilsCC Chemokine Secretion
Cytokine & chemokine secretion
C15orf48, CCL3, CCL3L3, CCL4, CCL4L2, CCRL2, CD83, CDKN1A +4 more

About the gene

SynonymsCKb4, exodus-1, LARC, MIP-3a, SCYA20, ST38
Chromosome2: 227805739-227817564
Predicted locationSecreted
Essential geneNo
Protein classPredicted secreted proteins
Molecular functionAntibiotic, Antimicrobial, Cytokine
Biological processChemotaxis, Inflammatory response

Function

Acts as a ligand for C-C chemokine receptor CCR6. Signals through binding and activation of CCR6 and induces a strong chemotactic response and mobilization of intracellular calcium ions. The ligand- receptor pair CCL20-CCR6 is responsible for the chemotaxis of dendritic cells (DC), effector/memory T-cells and B-cells and plays an important role at skin and mucosal surfaces under homeostatic and inflammatory conditions, as well as in pathology, including cancer and various autoimmune diseases. CCL20 acts as a chemotactic factor that attracts lymphocytes and, slightly, neutrophils, but not monocytes. Involved in the recruitment of both the pro-inflammatory IL17 producing helper T-cells (Th17) and the regulatory T-cells (Treg) to sites of inflammation. Required for optimal migration of thymic natural regulatory T cells (nTregs) and DN1 early thymocyte progenitor cells (By similarity). C- terminal processed forms have been shown to be equally chemotactically active for leukocytes. Positively regulates sperm motility and chemotaxis via its binding to CCR6 which triggers Ca2+ mobilization in the sperm which is important for its motility. Inhibits proliferation of myeloid progenitors in colony formation assays. May be involved in formation and function of the mucosal lymphoid tissues by attracting lymphocytes and dendritic cells towards epithelial cells (By similarity). Possesses antibacterial activity towards E.coli ATCC 25922 and S.aureus ATCC 29213.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.