SCUBA

TNFAIP3 — TNF alpha induced protein 3

TNFAIP3 belongs to a gene co-expression module in 13 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

TNFAIP3's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsNF-kB Feedback Response
TCR/AP1/NFKb pathway
ADGRE5, ARL5B, ATF3, CSRNP1, NFKBIZ, PPP1R15B, RASGEF1B, TIPARP +2 moreView in SCUBA
CD8⁺ T cellsTc17 Survival Program
Tc17 program
CCL20, DDX5, IRF1, MAF, MCL1, SAT1, TNFRSF4View in SCUBA
EndothelialNF-κB Activation
Inflammation
C2CD4B, HSPA6, ICAM5, IER3, MAP3K8, NFKBIA, NFKBID, PMAIP1 +5 moreView in SCUBA
FibroblastsNF-κB Stress Response
Inflammatory
EGR3, NAMPT, NCOA7, NFIL3, PHLDA1, PHLDA2, SAT1, SLC20A1 +3 moreView in SCUBA
Gamma-delta T cellsTCR Early Activation
TCR Signaling
BTG1, BTG2, CD69, CIRBP, CXCR4, DUSP1, EIF1, ETV3 +15 more
Goblet cellsNF-kB Inflammatory Signaling
chromatin regulation & transcription
CD69, CXCR4, DDX21, DUSP2, FOSL2, IRF1, NFKB2, REL +5 moreView in SCUBA
Innate lymphoid cellsNF-κB Inflammatory Activation
Inflammation
CDKN1A, CSRNP1, DUSP1, DUSP2, DUSP6, ELL2, EZR, FOS +26 moreView in SCUBA
Lymphatic endothelialNF-κB Negative Feedback
Inflammation
BMP2, C2CD4B, ICAM1, IRF8, KLF6, MAFF, NFIL3, NFKBIA +4 moreView in SCUBA
MacrophagesEarly response genes
Inflammatory
ATF3, BAG3, BTG2, CGAS, DNAJA1, DNAJA4, DNAJB1, DNAJB4 +39 moreView in SCUBA
MonocytesImmediate-Early Inflammatory
Inflammatory
CXCL2, CXCL3, CXCL8, DUSP2, EGR1, EGR2, NFKBIA, NFKBIZ +3 moreView in SCUBA
Mucosal-associated invariant T cellNF-κB Negative Feedback
Immune regulation
ARL4A, BCAS2, CSRNP1, CXCR4, ENSG00000285976, IDS, ITPRIP, NFKBIA +7 more
NeutrophilsNF-κB Activation
Inflammatory
EHD1, GRAMD1A, NBN, NFKB2, NFKBIA, NFKBIZ, PLAUR, PLEK +6 more
PericytesNF-kB Chemokine Response
Inflammatory
CCL2, CCL8, CXCL1, CXCL2, NCOA7, PRDM1, SOD2View in SCUBA

About the gene

SynonymsA20, OTUD7C
Chromosome6: 137867214-137883314
Predicted locationIntracellular
Essential geneNo
Protein classCancer-related genes, Disease related genes, Enzymes, Human disease related genes, Plasma proteins, Potential drug targets, Predicted intracellular proteins
Molecular functionDNA-binding, Hydrolase, Multifunctional enzyme, Protease, Thiol protease, Transferase
Biological processApoptosis, Inflammatory response, Ubl conjugation pathway

Function

Ubiquitin-editing enzyme that contains both ubiquitin ligase and deubiquitinase activities. Involved in immune and inflammatory responses signaled by cytokines, such as TNF-alpha and IL-1 beta, or pathogens via Toll-like receptors (TLRs) through terminating NF-kappa-B activity. Essential component of a ubiquitin-editing protein complex, comprising also RNF11, ITCH and TAX1BP1, that ensures the transient nature of inflammatory signaling pathways. In cooperation with TAX1BP1 promotes disassembly of E2-E3 ubiquitin protein ligase complexes in IL- 1R and TNFR-1 pathways; affected are at least E3 ligases TRAF6, TRAF2 and BIRC2, and E2 ubiquitin-conjugating enzymes UBE2N and UBE2D3. In cooperation with TAX1BP1 promotes ubiquitination of UBE2N and proteasomal degradation of UBE2N and UBE2D3. Upon TNF stimulation, deubiquitinates 'Lys-63'-polyubiquitin chains on RIPK1 and catalyzes the formation of 'Lys-48'-polyubiquitin chains. This leads to RIPK1 proteasomal degradation and consequently termination of the TNF- or LPS-mediated activation of NF-kappa-B. Deubiquitinates TRAF6 probably acting on 'Lys-63'-linked polyubiquitin. Upon T-cell receptor (TCR)- mediated T-cell activation, deubiquitinates 'Lys-63'-polyubiquitin chains on MALT1 thereby mediating disassociation of the CBM (CARD11:BCL10:MALT1) and IKK complexes and preventing sustained IKK activation. Deubiquitinates NEMO/IKBKG; the function is facilitated by TNIP1 and leads to inhibition of NF-kappa-B activation. Upon stimulation by bacterial peptidoglycans, probably deubiquitinates RIPK2. Can also inhibit I-kappa-B-kinase (IKK) through a non-catalytic mechanism which involves polyubiquitin; polyubiquitin promotes association with IKBKG and prevents IKK MAP3K7-mediated phosphorylation. Targets TRAF2 for lysosomal degradation. In vitro able to deubiquitinate 'Lys-11'-, 'Lys-48'- and 'Lys-63' polyubiquitin chains. Inhibitor of programmed cell death. Has a role in the function of the lymphoid system. Required for LPS-induced production of pro- inflammatory cytokines and IFN beta in LPS-tolerized macrophages.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.