SCUBA

IRF9 — Interferon regulatory factor 9

IRF9 belongs to a gene co-expression module in 8 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

IRF9's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsType I Interferon
Anti-viral
GBP2, GBP4, ISG15, ISG20, LY6E, MNDA, MX1, MX2 +9 moreView in SCUBA
CD4⁺ T cellsInterferon Response
Anti-viral
APOL6, ARL6IP5, BAX, GBP4, GBP5, IFI16, IQGAP1, MYH9 +4 moreView in SCUBA
FibroblastsType I Interferon
Inflammatory
ABHD5, HELZ2, ICAM4, IQCN, IRF7, IRF8, LACTB, MYLIP +2 moreView in SCUBA
Glial cellsInflammatory Activation Response
Inflammation
ANGPTL4, C11orf96, CD83, CEBPD, ENY2, GEM, IDI1, LMO4 +3 moreView in SCUBA
Innate lymphoid cellsIFN-driven ILC1 Activation
Inflammation
AFF3, AGPAT5, AKIRIN2, APMAP, ARF6, ARHGEF1, DNAJC1, DYNLT3 +21 moreView in SCUBA
MacrophagesIntegrated Stress Response
Stress
AKAP17A, ANKHD1, APBB3, C15orf39, CSF2RA, DDIT3, DDX39B, EMD +17 moreView in SCUBA
MonocytesType I Interferon Response
Antiviral
HEG1, IFITM1, LY6E, MYOF, OAS1, PLAAT4, PSMB10, WARS1View in SCUBA
Mucosal-associated invariant T cellType I Interferon
Inflammation
ABCF2, ACAA2, ANXA2R, BST2, CHST12, LY6E, LYSMD2, NDUFC2 +6 more

About the gene

SynonymsISGF3G
Chromosome14: 24161234-24168043
Predicted locationIntracellular
Essential geneNo
Protein classDisease related genes, Human disease related genes, Predicted intracellular proteins, Transcription factors
Molecular functionActivator, DNA-binding
Biological processAntiviral defense, Transcription, Transcription regulation

Function

Transcription factor that plays an essential role in anti- viral immunity. It mediates signaling by type I IFNs (IFN-alpha and IFN-beta). Following type I IFN binding to cell surface receptors, Jak kinases (TYK2 and JAK1) are activated, leading to tyrosine phosphorylation of STAT1 and STAT2. IRF9/ISGF3G associates with the phosphorylated STAT1:STAT2 dimer to form a complex termed ISGF3 transcription factor, that enters the nucleus. ISGF3 binds to the IFN stimulated response element (ISRE) to activate the transcription of interferon stimulated genes, which drive the cell in an antiviral state

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.