SCUBA

IRF8 — Interferon regulatory factor 8

IRF8 belongs to a gene co-expression module in 8 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

IRF8's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsNaive B-cell identity
B cell maturation
ALOX5AP, CD79B, HLA-DOB, NCF1, P2RX5, PLEKHF2, SEC62, SIAH2 +7 moreView in SCUBA
EndothelialEndothelial Chemokine Response
Chemotaxis
BMP2, CCL2, CEBPB, CEBPD, CNKSR3, CXCL1, CXCL2, CXCL3 +14 moreView in SCUBA
FibroblastsType I Interferon
Inflammatory
ABHD5, HELZ2, ICAM4, IQCN, IRF7, IRF9, LACTB, MYLIP +2 moreView in SCUBA
Gamma-delta T cellsXCL1/XCL2 Cytotoxic Activation
cytotoxicity
BCL2A1, CCL3L3, CCL4L2, FASLG, ICAM1, PLEKHO2, RILPL2, SNX18 +6 more
Hematopoietic progenitor cellsDendritic Cell Progenitor
Myeloid development
BLNK, CCDC50, CD180, CLEC4A, HDAC9, HERPUD1, LY86, NCF1 +1 more
Lymphatic endothelialNF-κB Negative Feedback
Inflammation
BMP2, C2CD4B, ICAM1, KLF6, MAFF, NFIL3, NFKBIA, PRNP +4 moreView in SCUBA
MacrophagesEfferocytosis Anti-inflammatory
Lysosomal & pahgocytosis
ABHD12, ADGRG5, AIG1, AXL, CCS, CD101, CD1D, CD300A +18 moreView in SCUBA
Mucosal-associated invariant T cellTissue Residency
Tissue residence
ACSL1, AMFR, CRACDL, DHX36, HES4, ITGAE, LZTFL1, MACO1 +8 more

About the gene

SynonymsICSBP, ICSBP1, IRF-8
Chromosome16: 85899116-85922606
Predicted locationIntracellular
Essential geneNo
Protein classDisease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins, Transcription factors
Molecular functionActivator, DNA-binding, Repressor
Biological processAutophagy, Transcription, Transcription regulation

Function

Transcription factor that specifically binds to the upstream regulatory region of type I interferon (IFN) and IFN-inducible MHC class I genes (the interferon consensus sequence (ICS)). Can both act as a transcriptional activator or repressor (By similarity). Plays a negative regulatory role in cells of the immune system (By similarity). Involved in CD8(+) dendritic cell differentiation by forming a complex with the BATF-JUNB heterodimer in immune cells, leading to recognition of AICE sequence (5'-TGAnTCA/GAAA- 3'), an immune-specific regulatory element, followed by cooperative binding of BATF and IRF8 and activation of genes (By similarity). Required for the development of plasmacytoid dendritic cells (pDCs), which produce most of the type I IFN in response to viral infection (By similarity). Positively regulates macroautophagy in dendritic cells. Acts as a transcriptional repressor of osteoclast differentiation factors such as NFATC1 and EEIG1 (By similarity).

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.