SCUBA

ARF6 — ADP ribosylation factor 6

ARF6 belongs to a gene co-expression module in 8 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

ARF6's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsT cell activation
TCR/AP1/NFKb pathway
ANKS1B, CCT6A, EHD4, HNRNPM, IRF4, MAP2K3, PFDN2, TRIB1 +3 moreView in SCUBA
CD8⁺ T cellsActin Cytoskeleton
Cytoskeletal
ACTB, ARPC1B, ARPC4, BRK1, CAPZB, CFL1, CORO1A, FKBP1A +10 moreView in SCUBA
Gamma-delta T cellsmRNA Splicing Regulation
RNA processing & translation
BTG3, CAPN7, CDV3, CELF2, CNBD2, CUL3, CYTIP, ELF1 +18 more
Innate lymphoid cellsIFN-driven ILC1 Activation
Inflammation
AFF3, AGPAT5, AKIRIN2, APMAP, ARHGEF1, DNAJC1, DYNLT3, ELOVL5 +21 moreView in SCUBA
Lymphatic endothelialNotch TGF-β Endothelial
endothelial development
ARL4C, C16orf87, CCNL1, CLK1, DEDD2, ELOC, GPBP1, HEY1 +11 moreView in SCUBA
MacrophagesPhagocytic Endolysosomal
Lysosomal & pahgocytosis
ABHD2, ACTN4, AP3S1, ATP6V1B2, CD151, CERS2, CNIH1, CPD +27 moreView in SCUBA
Mucosal-associated invariant T cellRNA Splicing m6A
RNA processing & translation
ARF1, ATP5F1B, CIRBP, CORO7, EIF1B, EIF5A, EMD, GUK1 +15 more
Natural Killer cellsGlucocorticoid Response
Immune regulation
AREG, BCLAF1, BEX2, BEX4, ELF1, ELL2, EPC1, GABARAPL1 +11 moreView in SCUBA

About the gene

Chromosome14: 49893079-49897054
Predicted locationIntracellular
Essential geneNo
Protein classEnzymes, Predicted intracellular proteins, RAS pathway related proteins
Molecular functionHydrolase
Biological processCell cycle, Cell division, Differentiation, Neurogenesis, Protein transport, Transport

Function

GTP-binding protein involved in protein trafficking that regulates endocytic recycling and cytoskeleton remodeling. GTP-bound form plays an important role in the transport of multiple palmitoylated proteins form the Golgi to the plasma membrane. Required for normal completion of mitotic cytokinesis (By similarity). Plays a role in the reorganization of the actin cytoskeleton and the formation of stress fibers (By similarity). Involved in the regulation of dendritic spine development, contributing to the regulation of dendritic branching and filopodia extension. Potentiates the neurite outgrowth in primary neurons by interacting with the molecular adapter APBB1. Plays an important role in membrane trafficking, during junctional remodeling and epithelial polarization. Regulates surface levels of adherens junction proteins such as CDH1 (By similarity). Required for NTRK1 sorting to the recycling pathway from early endosomes (By similarity). (Microbial infection) Functions as an allosteric activator of the cholera toxin catalytic subunit, an ADP-ribosyltransferase. (Microbial infection) Plays a key role in the endocytosis of enterovirus 71 and thus viral entry into brain microvascular endothelial cells

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.