SCUBA

ISG20 — Interferon stimulated exonuclease gene 20

ISG20 belongs to a gene co-expression module in 12 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

ISG20's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsType I Interferon
Anti-viral
GBP2, GBP4, IRF9, ISG15, LY6E, MNDA, MX1, MX2 +9 moreView in SCUBA
CD8⁺ T cellsAntiviral ISG Response
Inflammation
CMPK2, HELZ2, HERC5, IFIT1, IFIT3, MX2, NT5C3A, PPM1K +1 moreView in SCUBA
EndothelialIFN-gamma Response
Inflammation
APOL2, APOL6, BATF2, CARD16, CASP1, CD40, CXCL10, CXCL11 +18 moreView in SCUBA
EnterocytesInflammatory hypoxic response
Stress
CAPN2, LRP10, MUC13, MXD1, TM4SF20, TMBIM1, VEGFAView in SCUBA
FibroblastsHypoxia Response
Stress
ACSL4, AP2S1, ARFGAP3, C4orf48, EPAS1, HIF1A, IL4R, NECTIN2 +8 moreView in SCUBA
Gamma-delta T cellsTCR Inhibitory Signaling
Exhaustion
AFF4, CBLB, CCNH, CCNT1, CHD2, CRYBG1, FYN, PARP8 +9 more
Innate lymphoid cellsInflammasome Activation
Inflammation
ANKRD28, AP3D1, ARHGEF7, CCNH, CD55, CDC42SE1, CHD7, CHKA +19 moreView in SCUBA
MacrophagesType I Interferon
Antiviral
CCL8, CMPK2, HELZ2, IFI27, IFI44, IFI44L, IFI6, IFIT1 +13 moreView in SCUBA
MonocytesIFN-gamma Response
Antiviral
APOL2, APOL6, CXCL10, ETV7, GBP1, GBP4, GBP5, IFIH1 +6 moreView in SCUBA
Mucosal-associated invariant T cellT cell Homeostasis
T cell maturation
APOL6, CD40LG, CNDP2, FAM118A, FCMR, GPR171, IFIH1, IL7R +19 more
NeutrophilsIFN-gamma Response
Antiviral
CARD16, CCR1, FFAR2, GBP1, GBP5, IFIT2, IFIT3, IFITM3 +4 more
PericytesBasement Membrane Remodeling
ECM remodeling
ADA, C4orf48, CYBA, DKK3, EFEMP2, G0S2, LAMB3, RCN3 +2 moreView in SCUBA

About the gene

SynonymsCD25, HEM45
Chromosome15: 88635670-88656483
Predicted locationIntracellular
Essential geneNo
Protein classEnzymes, Predicted intracellular proteins
Molecular functionExonuclease, Hydrolase, Nuclease, RNA-binding
Biological processAntiviral defense, Immunity, Innate immunity, rRNA processing

Function

Interferon-induced antiviral exoribonuclease that acts mainly on single-stranded RNA. Exhibits antiviral activity against RNA viruses including hepatitis C virus (HCV), hepatitis A virus (HAV) and yellow fever virus (YFV). Inhibition of several viruses such as chikungunya virus (CHIKV) does not involve the degradation of viral RNAs, but rather the inhibition of translation of viral proteins (By similarity). Exerts a translational control over a large panel of non-self RNA substrates while sparing endogenous transcripts. This activity correlates with the protein's ability to localize in cytoplasmic processing bodies. May also act as master regulator of over hundred interferon stimulated genes leading to viral genome translation inhibition (By similarity). May play additional roles in the maturation of snRNAs and rRNAs, and in ribosome biogenesis.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.