SCUBA

PLXND1 — Plexin D1

PLXND1 belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

PLXND1's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsTfh IL21 help
B cell help
APBB2, CDYL2, GDF7, HIF1A, IL21, KIAA1671, MFHAS1, MYB +6 moreView in SCUBA
EndothelialArterial EC Identity
Endothelial cell development
ACVRL1, ANXA11, ATP13A2, ENG, HPCAL1, HYAL1, LDB2, MACF1 +7 moreView in SCUBA
Gamma-delta T cellsEffector Cytokine Secretion
Inflammation
APBA2, ASPH, CCL3, CCL4, CMC1, CYRIA, DTHD1, DTNBP1 +25 more
Lymphatic endothelialEndothelial Identity
endothelial development
CHST12, ENDOD1, EPHB4, F2R, F8, GALNT1, KDR, NR2F2 +4 moreView in SCUBA
MacrophagesMonocyte Phagocytic Identity
Lysosomal & pahgocytosis
CD14, CD99, CMTM3, DUSP3, FCGR2A, FLOT2, INF2, MARVELD1 +7 moreView in SCUBA
MonocytesM2 Macrophage Polarization
Innate immunity
AHNAK, CRTAP, F13A1, GLDN, GSN, IDH1, IL13RA1, LDHB +7 moreView in SCUBA
Mucosal-associated invariant T cellTranscriptional Co-regulation
DNA/chromatin regulation
ALYREF, CCNT1, CSNK1E, FBXO7, MXRA7, PLEKHM2, TADA2B, WDR26 +1 more
PericytesPericyte Vascular Identity
Developmental
AHR, ARHGAP29, CA4, CD46, MEF2C, MYO6, NOTCH1, PDE1C +10 moreView in SCUBA
Smooth muscle cellsER-Golgi Secretory
Protein processing & ER
ARL2, ATP2A2, BMP2, CD46, LAMB2, RNASEH2C, SPTB, YIF1AView in SCUBA

About the gene

SynonymsKIAA0620
Chromosome3: 129555214-129606676
Predicted locationIntracellular, Membrane
Essential geneNo
Protein classPlasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Molecular functionDevelopmental protein, Receptor
Biological processAngiogenesis

Function

Cell surface receptor for SEMA4A and for class 3 semaphorins, such as SEMA3A, SEMA3C and SEMA3E. Plays an important role in cell-cell signaling, and in regulating the migration of a wide spectrum of cell types. Regulates the migration of thymocytes in the medulla. Regulates endothelial cell migration. Plays an important role in ensuring the specificity of synapse formation. Required for normal development of the heart and vasculature (By similarity). Mediates anti-angiogenic signaling in response to SEMA3E.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.