SCUBA

SRM — Spermidine synthase

SRM belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

SRM's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsNucleotide Metabolism Biosynthesis
Mitochondrial & OxPhos
ATIC, ATP5MC1, C1QBP, CCT7, DCTPP1, EBNA1BP2, EEF1E1, EIF5A +13 moreView in SCUBA
CD4⁺ T cellsNucleotide biosynthesis
Housekeeping
CCT7, COPRS, DCTPP1, MRPL12, MRPL4, NHP2, NME1, PPA1 +6 moreView in SCUBA
EndothelialER Protein Processing
Protein processing & ER
AP2S1, ATOX1, C1QBP, CCT3, DBI, ENO1, NHP2, OSTC +5 moreView in SCUBA
FibroblastsRho GTPase Cytoskeletal
Cytoskeletal
APRT, CLIC1, CYBA, HSBP1, LY6E, RAB34, RHOA, RHOC +2 moreView in SCUBA
Gamma-delta T cellsGPCR-AKT-MAPK Signaling
TCR Signaling
ADNP, AKT1, ALYREF, B3GALT6, BRD4, BRI3, BTBD6, CENPB +29 more
Goblet cellsMitochondrial Biogenesis
Mitochondrial & OxPhos
ARPC5L, CALM1, EIF5A, LSM7, MRPL17, MRPL20, MRPL41, PFN1 +4 moreView in SCUBA
Hematopoietic progenitor cellsNucleotide Metabolism
Housekeeping
DCTPP1, DNPH1, EIF4EBP1, FKBP4, GCSH, METTL26, MRPL12, NHP2 +2 more
MacrophagesMitochondrial Biogenesis
Mitochondrial & OxPhos
AIMP1, ATP5F1D, ATP5MC1, C1QBP, CCT2, CCT3, CCT7, CHCHD1 +38 moreView in SCUBA
Mucosal-associated invariant T cellPolycomb Repression
DNA/chromatin regulation
BTBD6, CBX4, CD81, CSNK1G2, CTBP1, DUS1L, GNB1, GRK6 +15 more

About the gene

SynonymsSPS1, SRML1
Chromosome1: 11054584-11060020
Predicted locationIntracellular
Essential geneNo
Protein classEnzymes, Metabolic proteins, Predicted intracellular proteins
Molecular functionTransferase
Biological processPolyamine biosynthesis, Spermidine biosynthesis

Function

Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM). Has a strong preference for putrescine as substrate, and has very low activity towards 1,3- diaminopropane. Has extremely low activity towards spermidine

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.