SCUBA

EIF5A — Eukaryotic translation initiation factor 5A

EIF5A belongs to a gene co-expression module in 11 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

EIF5A's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsNucleotide Metabolism Biosynthesis
Mitochondrial & OxPhos
ATIC, ATP5MC1, C1QBP, CCT7, DCTPP1, EBNA1BP2, EEF1E1, GADD45GIP1 +13 moreView in SCUBA
CD4⁺ T cellsER stress UPR
Protein processing & ER
CCT2, CDK2AP2, CRELD2, DDX39A, DNAJB11, DSTN, GPSM3, GTF3A +9 moreView in SCUBA
EndothelialMitochondrial Oxidative Stress
Stress
AGTRAP, AP2M1, ECHS1, ECSCR, EDF1, NEDD8, PARK7, PHPT1 +5 moreView in SCUBA
FibroblastsProteasome Biogenesis
Housekeeping
MRPL14, NME1, NOP10, POMP, SEC61B, SEC61G, SNRPD1, SNRPE +1 moreView in SCUBA
Gamma-delta T cellsmRNA Splicing & Trafficking
RNA processing & translation
ARF1, ARL6IP1, ARRDC2, B3GNT2, C17orf49, CCDC12, CWC15, DDX39A +19 more
Goblet cellsMitochondrial Biogenesis
Mitochondrial & OxPhos
ARPC5L, CALM1, LSM7, MRPL17, MRPL20, MRPL41, PFN1, PRELID1 +4 moreView in SCUBA
Hematopoietic progenitor cellsProteostasis & OxPhos
Mitochondrial & OxPhos
COX5A, HNRNPF, HSPA8, ILF2, MRPS34, NDUFB6, PSMB5, SLBP
Innate lymphoid cellsTRiC Chaperonin Folding
Protein processing & ER
ATP6V0D1, CACYBP, CCT2, CCT3, CCT4, CCT5, ELOC, FAM162A +9 moreView in SCUBA
Lymphatic endothelialOxidative Stress Response
Stress
ANXA5, ATP6V0B, CCT3, CD59, DRAP1, GPX4, NUPR1, PDLIM4 +3 moreView in SCUBA
Mucosal-associated invariant T cellRNA Splicing m6A
RNA processing & translation
ARF1, ARF6, ATP5F1B, CIRBP, CORO7, EIF1B, EMD, GUK1 +15 more
Natural Killer cellsImmunoproteasome Activation
Inflammation
LDHB, PDIA6, PPIA, PSMB3, PSMB8, PSMB9, PSME1, PSME2View in SCUBA

About the gene

SynonymsEIF-5A, EIF5A1, MGC104255, MGC99547
Chromosome17: 7306999-7312463
Predicted locationIntracellular
Essential geneYes
Protein classCancer-related genes, Disease related genes, Essential proteins, Plasma proteins, Potential drug targets, Predicted intracellular proteins, Transporters
Molecular functionElongation factor, RNA-binding
Biological processProtein biosynthesis

Function

Translation factor that promotes translation elongation and termination, particularly upon ribosome stalling at specific amino acid sequence contexts. Binds between the exit (E) and peptidyl (P) site of the ribosome and promotes rescue of stalled ribosome: specifically required for efficient translation of polyproline-containing peptides as well as other motifs that stall the ribosome (By similarity). Acts as a ribosome quality control (RQC) cofactor by joining the RQC complex to facilitate peptidyl transfer during CAT tailing step (By similarity). Also involved in actin dynamics and cell cycle progression, mRNA decay and probably in a pathway involved in stress response and maintenance of cell wall integrity. With syntenin SDCBP, functions as a regulator of p53/TP53 and p53/TP53-dependent apoptosis. Also regulates TNF-alpha-mediated apoptosis. Mediates effects of polyamines on neuronal process extension and survival. Is required for autophagy by assisting the ribosome in translating the ATG3 protein at a specific amino acid sequence, the 'ASP-ASP-Gly' motif, leading to the increase of the efficiency of ATG3 translation and facilitation of LC3B lipidation and autophagosome formation. (Microbial infection) Cellular cofactor of human T-cell leukemia virus type I (HTLV-1) Rex protein and of human immunodeficiency virus type 1 (HIV-1) Rev protein, essential for mRNA export of retroviral transcripts

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.