SCUBA

MANF — Mesencephalic astrocyte derived neurotrophic factor

MANF belongs to a gene co-expression module in 8 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

MANF's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsER stress UPR
Protein processing & ER
CCT2, CDK2AP2, CRELD2, DDX39A, DNAJB11, DSTN, EIF5A, GPSM3 +9 moreView in SCUBA
CD8⁺ T cellsComplex I / OXPHOS
Mitochondrial & OxPhos
DAD1, GSTO1, GTF3C6, NDUFA12, NDUFA4, NDUFAB1, NDUFB3, NDUFS6 +1 moreView in SCUBA
EndothelialUPR / ER Stress
Protein processing & ER
CALR, CANX, CTSB, CTTN, GRN, HDLBP, HSP90B1, HSPA5 +10 moreView in SCUBA
FibroblastsProteasome Assembly
Housekeeping
ATOX1, C1QBP, DBI, DYNLT1, MRPL52, NDUFV2, PDCD5, PRELID1 +4 moreView in SCUBA
Goblet cellsUPR Chaperone Response
Stress
CALR, CRELD2, GMPPB, LRRC59, NUCB2, P4HB, PDIA3, PDIA4 +2 moreView in SCUBA
Innate lymphoid cellsProteasome ER Proteostasis
Protein processing & ER
ATP5MC1, ATP5PF, DBI, GNG5, GTF3C6, HNRNPK, IL4I1, MED10 +19 moreView in SCUBA
MacrophagesER Stress UPR
Stress
ANKRD9, APEH, ARMCX6, BET1L, CALR, CCDC107, COPS2, DNAJB11 +20 moreView in SCUBA
MonocytesTolerogenic Monocyte Activation
Inflammatory
CCR5, CD40, CD80, GGT5, IDO1, IL4I1, PLA2G7, SLAMF7 +1 moreView in SCUBA

About the gene

SynonymsARMET, ARP
Chromosome3: 51385291-51389397
Predicted locationSecreted
Essential geneNo
Protein classPlasma proteins, Predicted secreted proteins
Molecular functionGrowth factor
Biological processStress response, Unfolded protein response

Function

Selectively promotes the survival of dopaminergic neurons of the ventral mid-brain. Modulates GABAergic transmission to the dopaminergic neurons of the substantia nigra (By similarity). Enhances spontaneous, as well as evoked, GABAergic inhibitory postsynaptic currents in dopaminergic neurons (By similarity). Inhibits cell proliferation and endoplasmic reticulum (ER) stress-induced cell death. Retained in the ER/sarcoplasmic reticulum (SR) through association with the endoplasmic reticulum chaperone protein HSPA5 under normal conditions. Stabilizes HSPA5/BiP in its substrate-bound ADP state, which facilitates HSPA5/BiP incorporation into chaperone-client complexes during endoplasmic reticulum stress, its interaction with HSPA5/BiP inhibits ATP binding to HSPA5/BiP and subsequent nucleotide exchange (By similarity). As a result acts as a repressor of the unfolded protein response (UPR) pathway (By similarity). Up-regulated and secreted by the ER/SR in response to ER stress and hypoxia. Following secretion by the ER/SR, directly binds to 3-O-sulfogalactosylceramide, a lipid sulfatide in the outer cell membrane of target cells. Sulfatide binding promotes its cellular uptake by endocytosis, and is required for its role in alleviating ER stress and cell toxicity under hypoxic and ER stress conditions. Essential for embryonic lung development (By similarity). Required for the correct postnatal temporal and structural development of splenic white pulp (By similarity). Required for the repair-associated myeloid response in skeletal muscle, acts as a regulator of phenotypic transition towards prorepair macrophages in response to muscle injury and as a result limits excessive proinflammatory signaling (By similarity). Represses RELA expression and therefore NF-kB signaling in the myocardium, as a result limits macrophage infiltration of injured tissue and M1 macrophage differentiation in response to myocardial injury (By similarity). Required for endochondral ossification in long bones and the skull during postnatal development (By similarity).

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.