SCUBA

CYLD — CYLD lysine 63 deubiquitinase

CYLD belongs to a gene co-expression module in 8 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

CYLD's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsTNF/NF-kB response
BCR/AP1/NFKb pathway
ADGRE5, ATF3, BHLHE40, CHD1, CMTM6, DUSP5, FMNL1, IRF2BP2 +7 moreView in SCUBA
CD4⁺ T cellsNF-kB regulation
TCR/AP1/NFKb pathway
ARIH2, CD58, DAD1, DERL1, EED, ELOVL5, NFAT5, OTULIN +9 moreView in SCUBA
Gamma-delta T cellsStress Negative Feedback
Immune regulation
ANKRD12, AZIN1, CCDC186, CDKN1A, DENND4A, DNAJB6, DUSP10, ELL +7 more
Hematopoietic progenitor cellsLymphoid Progenitor TFs
Lymphcyte development
ADAM28, AFF3, ANKRD44, CYFIP2, HLA-DMB, MEF2C, PDE7A, RNASEH2B +4 more
Innate lymphoid cellsSplicing & Transcription
RNA processing & translation
ACTR2, BDP1, CDC5L, DHX36, FXR1, GPATCH2, MTPN, PHF20L1 +12 moreView in SCUBA
Lymphatic endothelialStress Kinase Signaling
Stress
ATP13A3, CLN8, CREBRF, DYRK3, INO80D, IPO5, KLHL21, KMT2A +6 moreView in SCUBA
MacrophagesNF-κB Activation
Inflammatory
BCL3, BLOC1S6, CD83, CFLAR, CHMP1B, CNOT2, CSRNP1, DNAJB6 +33 moreView in SCUBA
Mucosal-associated invariant T cellRUNX3 Tissue Identity
T cell maturation
B4GALT1, CD44, CDK17, CHD1, EML4, EP300, GPBP1, KMT2E +10 more

About the gene

SynonymsCYLD1, KIAA0849, USPL2
Chromosome16: 50742050-50801935
Predicted locationIntracellular
Essential geneNo
Protein classCancer-related genes, Disease related genes, Enzymes, Human disease related genes, Metabolic proteins, Potential drug targets, Predicted intracellular proteins
Molecular functionHydrolase, Protease, Thiol protease
Biological processCell cycle, Immunity, Innate immunity, Ubl conjugation pathway, Wnt signaling pathway

Function

Deubiquitinase that specifically cleaves 'Lys-63'- and linear 'Met-1'-linked polyubiquitin chains and is involved in NF-kappa-B activation and TNF-alpha-induced necroptosis. Negatively regulates NF-kappa-B activation by deubiquitinating upstream signaling factors. Contributes to the regulation of cell survival, proliferation and differentiation via its effects on NF-kappa-B activation. Negative regulator of Wnt signaling. Inhibits HDAC6 and thereby promotes acetylation of alpha-tubulin and stabilization of microtubules. Plays a role in the regulation of microtubule dynamics, and thereby contributes to the regulation of cell proliferation, cell polarization, cell migration, and angiogenesis. Required for normal cell cycle progress and normal cytokinesis. Inhibits nuclear translocation of NF-kappa-B. Plays a role in the regulation of inflammation and the innate immune response, via its effects on NF- kappa-B activation. Dispensable for the maturation of intrathymic natural killer cells, but required for the continued survival of immature natural killer cells (By similarity). Negatively regulates TNFRSF11A signaling and osteoclastogenesis (By similarity). Involved in the regulation of ciliogenesis, allowing ciliary basal bodies to migrate and dock to the plasma membrane; this process does not depend on NF-kappa-B activation (By similarity). Ability to remove linear ('Met-1'-linked) polyubiquitin chains regulates innate immunity and TNF-alpha-induced necroptosis: recruited to the LUBAC complex via interaction with SPATA2 and restricts linear polyubiquitin formation on target proteins. Regulates innate immunity by restricting linear polyubiquitin formation on RIPK2 in response to NOD2 stimulation. Involved in TNF-alpha-induced necroptosis by removing linear ('Met-1'-linked) polyubiquitin chains from RIPK1, thereby regulating the kinase activity of RIPK1 (By similarity). Negatively regulates intestinal inflammation by removing 'Lys-63' linked polyubiquitin chain of NLRP6, thereby reducing the interaction between NLRP6 and PYCARD/ASC and formation of the NLRP6 inflammasome (By similarity). Does not catalyze deubiquitination of heterotypic 'Lys-63'-/'Lys-48'-linked branched ubiquitin chains. Removes 'Lys-63' linked polyubiquitin chain of MAP3K7, which inhibits phosphorylation and blocks downstream activation of the JNK-p38 kinase cascades. Also removes 'Lys-63'-linked polyubiquitin chains of MAP3K1 and MA3P3K3, which inhibit their interaction with MAP2K1 and MAP2K2.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.