SCUBA

CD44 — CD44 molecule (Indian blood group)

CD44 belongs to a gene co-expression module in 13 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

CD44's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsInterferon Response
Anti-viral
ACAP1, ARHGAP15, BCL2, CD46, DSE, EML4, FCGR2B, GATAD1 +7 moreView in SCUBA
CD8⁺ T cellsEffector-Memory CD8
T cell maturation
CD27, CMC1, CST7, CXCR3, DUSP2, EOMES, F2R, HLA-E +8 moreView in SCUBA
FibroblastsInflammatory Fibroblast Activation
Inflammatory
ALPL, ARL4C, CHST15, CXCL6, DCBLD1, EVA1A, MAP3K5, MICALL2 +4 moreView in SCUBA
Gamma-delta T cellsNaive T cell quiescence
T cell maturation
ADAP1, ARL4C, BCL9L, BMAL1, CALM1, CAMK1D, CD5, CD6 +10 more
Glial cellsHyaluronan-CD44 Remodeling
ECM remodeling
C4orf48, CBX3, HAS2, HES4, MIA, PLEKHA4, WWTR1View in SCUBA
Hematopoietic progenitor cellsMultipotent Progenitor State
Stemness
CD99, FLT3, GBP2, GLIPR1, IL6R, PLCB1, PRAM1, PROM1
Innate lymphoid cellsILC Survival Residency
Gut residency
ARID4B, BAZ1A, BCL2A1, CSF2, CTSH, CXCL8, DUSP4, ENTPD1 +25 moreView in SCUBA
MacrophagesInflammatory Monocyte Activation
Inflammatory
ACTN1, ADAM8, AGTRAP, ANXA2, ANXA4, C15orf48, CD9, DRAM1 +21 moreView in SCUBA
MonocytesTNF-driven Activation
Inflammatory
ATP13A3, DCUN1D3, DSE, GK, IVNS1ABP, LAMB3, LITAF, POMP +3 moreView in SCUBA
Mucosal-associated invariant T cellRUNX3 Tissue Identity
T cell maturation
B4GALT1, CDK17, CHD1, CYLD, EML4, EP300, GPBP1, KMT2E +10 more
NeutrophilsPhagocytic Membrane Signaling
Phagocytosis
APLP2, ATP6V1B2, CDC42EP3, CLIC1, EFHD2, FCER1G, FLOT1, GRINA +9 more
PericytesInflammatory ECM Remodeling
ECM remodeling
CCDC80, FHL2, FMO3, FN1, PDLIM3, RARRES2, TGFBI, TNC +1 moreView in SCUBA
Smooth muscle cellsAdhesion Activation
Migration & adhesion
ANXA2, ATP1B3, CAPNS1, CYBRD1, FHL2, LAMC1, LGALS3, LGALS3BP +3 moreView in SCUBA

About the gene

SynonymsCD44R, CSPG8, HCELL, IN, MC56, MDU2, MDU3, MIC4, Pgp1
Chromosome11: 35138882-35232402
Predicted locationIntracellular, Membrane, Secreted
Essential geneNo
Protein classBlood group antigen proteins, Cancer-related genes, CD markers, FDA approved drug targets, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins, Predicted secreted proteins, Transporters
Molecular functionBlood group antigen, Receptor
Biological processCell adhesion

Function

Cell-surface receptor that plays a role in cell-cell interactions, cell adhesion and migration, helping them to sense and respond to changes in the tissue microenvironment. Participates thereby in a wide variety of cellular functions including the activation, recirculation and homing of T-lymphocytes, hematopoiesis, inflammation and response to bacterial infection. Engages, through its ectodomain, extracellular matrix components such as hyaluronan/HA, collagen, growth factors, cytokines or proteases and serves as a platform for signal transduction by assembling, via its cytoplasmic domain, protein complexes containing receptor kinases and membrane proteases. Such effectors include PKN2, the RhoGTPases RAC1 and RHOA, Rho-kinases and phospholipase C that coordinate signaling pathways promoting calcium mobilization and actin-mediated cytoskeleton reorganization essential for cell migration and adhesion.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.