SCUBA

ITGB7 — Integrin subunit beta 7

ITGB7 belongs to a gene co-expression module in 9 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

ITGB7's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsTissue-resident memory B
B cell maturation
CALHM2, CCR1, CMTM7, FCRL4, FGD4, GSN, PIK3R6, PLD4 +4 moreView in SCUBA
CD4⁺ T cellsTh17 lineage
Th17 fate
ADA, ARHGEF3, CD226, CD52, DENND3, EVL, IDH2, IL17RE +13 moreView in SCUBA
CD8⁺ T cellsCytotoxic Gut Effector
cytotoxicity
ATP8B4, CCND2, CD63, CEBPB, CSF1, CTSA, GNLY, GNPTAB +3 moreView in SCUBA
Gamma-delta T cellsEffector Cell Migration
migration & adhesion
ADAM15, ADAM8, ANXA2, APOBEC3G, CD52, CTSC, DSTN, FUT11 +17 more
Hematopoietic progenitor cellsILC/NK Development
Lymphcyte development
ACY3, ADGRD1, ATP10A, CCDC141, CD3E, CYSLTR1, ID2, NFATC4 +7 more
MacrophagesEfferocytosis Anti-inflammatory
Lysosomal & pahgocytosis
ABHD12, ADGRG5, AIG1, AXL, CCS, CD101, CD1D, CD300A +18 moreView in SCUBA
MonocytesMulti-lineage Contamination
Cell contamination
AZU1, CLU, CYP19A1, E2F2, ELANE, GM2A, GYPC, MS4A3 +4 moreView in SCUBA
Mucosal-associated invariant T cellCytoskeletal Remodeling Migration
migration & adhesion
ADAM8, BIN2, C11orf21, CAPN1, CAPN2, CD52, CDC25B, CNN2 +14 more
Natural Killer cellsGut-Homing NK Maturation
Gut residency
ANXA2, BIN1, DHRS7, HECA, IFI27L2, KLF9, LGALS1, NDUFB7 +5 moreView in SCUBA

About the gene

Chromosome12: 53191323-53207282
Predicted locationIntracellular, Membrane
Essential geneNo
Protein classCancer-related genes, FDA approved drug targets, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Molecular functionHost cell receptor for virus entry, Integrin, Receptor
Biological processCell adhesion

Function

Integrin ITGA4/ITGB7 (alpha-4/beta-7) (Peyer patches-specific homing receptor LPAM-1) is an adhesion molecule that mediates lymphocyte migration and homing to gut-associated lymphoid tissue (GALT) (Probable). Integrin ITGA4/ITGB7 interacts with the cell surface adhesion molecules MADCAM1 which is normally expressed by the vascular endothelium of the gastrointestinal tract. Also interacts with VCAM1 and fibronectin, an extracellular matrix component (Probable). It recognizes one or more domains within the alternatively spliced CS-1 region of fibronectin (Probable). Interactions involve the tripeptide L-D-T in MADCAM1, and L-D-V in fibronectin (Probable). Integrin ITGAE/ITGB7 (alpha-E/beta-7, HML-1) is a receptor for E-cadherin. (Microbial infection) Binds to HIV-1 gp120, thereby allowing the virus to enter GALT, which is thought to be the major trigger of AIDS disease. Interaction would involve a tripeptide L-D-I in HIV-1 gp120

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.