SCUBA

LAMP1 — Lysosomal associated membrane protein 1

LAMP1 belongs to a gene co-expression module in 8 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

LAMP1's module in each cell type

Cell typeModuleShares the module with
CD4⁺ T cellsEffector Immune Activation
Immune regulation
ABI3, APBB1IP, ASB2, BUB3, CALCOCO2, CASP4, COMMD7, CTSD +7 moreView in SCUBA
EnterocytesLysosomal/ferritin housekeeping
Housekeeping
APLP2, CD164, CRIP1, CST3, EDF1, FTH1, FTL, GPA33 +5 moreView in SCUBA
Gamma-delta T cellsTCR Vesicular Trafficking
TCR Signaling
ARL2BP, ARL8A, ARRDC1, C18orf32, CCDC92, CD3D, CD3G, CD99 +14 more
Glial cellsLysosomal Sphingolipid Metabolism
Housekeeping
ASAH1, BEX4, CLIC4, EID1, PSAP, SERPINB6, SGCE, SSPNView in SCUBA
Innate lymphoid cellsMitochondrial Lysosomal Housekeeping
Mitochondrial & OxPhos
BTF3L4, C14orf119, EMC6, ETFA, IER3IP1, JTB, MRPL14, MRPS16 +7 moreView in SCUBA
Lymphatic endothelialER-Lysosomal Processing
Protein processing & ER
BCAP31, CTSD, DHRS7, EHD2, GRN, OS9, PSAP, RPN2 +2 moreView in SCUBA
MacrophagesER-Lysosome Trafficking
Vesicular traficking
BPNT2, CALU, CLPTM1L, CTSB, DHRS7, EMC10, GBA1, GNS +21 moreView in SCUBA
Smooth muscle cellsLysosomal-secretory processing
Protein processing & ER
BZW2, COPZ1, CTSL, PIGT, PLOD2, PRMT2, RGS9, RPN2 +5 moreView in SCUBA

About the gene

SynonymsCD107a
Chromosome13: 113297239-113323672
Predicted locationMembrane
Essential geneNo
Protein classCD markers, Plasma proteins, Predicted membrane proteins, Transporters
Molecular functionHost cell receptor for virus entry, Receptor
Biological processHost-virus interaction

Function

Lysosomal membrane glycoprotein which plays an important role in lysosome biogenesis, lysosomal pH regulation, autophagy and cholesterol homeostasis. Acts as an important regulator of lysosomal lumen pH regulation by acting as a direct inhibitor of the proton channel TMEM175, facilitating lysosomal acidification for optimal hydrolase activity. Also plays an important role in NK-cells cytotoxicity. Mechanistically, participates in cytotoxic granule movement to the cell surface and perforin trafficking to the lytic granule. In addition, protects NK-cells from degranulation-associated damage induced by their own cytotoxic granule content. Presents carbohydrate ligands to selectins. (Microbial infection) Acts as a receptor for Lassa virus glycoprotein. Also promotes fusion of the virus with host membrane in less acidic endosomes. (Microbial infection) Supports the FURIN-mediated cleavage of mumps virus fusion protein F by interacting with both FURIN and the unprocessed form but not the processed form of the viral protein F

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.