SCUBA

EDF1 — Endothelial differentiation related factor 1

EDF1 belongs to a gene co-expression module in 13 of 28 SCUBA cell types. Each module groups genes that rise and fall together in that cell type; the genes it shares a module with are its closest co-expression partners there.

EDF1's module in each cell type

Cell typeModuleShares the module with
CD19⁺ B cellsOxidative Phosphorylation
Mitochondrial & OxPhos
ATP5F1E, ATP5MC2, C19orf53, COX7A2, OST4, SRP14, TMA7, UQCR11View in SCUBA
CD4⁺ T cellsRNA processing splicing
RNA processing
BUD31, DNAJC8, EIF2S1, GTF3C6, HPRT1, ILF2, LAMTOR5, MIIP +11 moreView in SCUBA
CD8⁺ T cellsmRNA Stability/Processing
RNA processing & translation
C19orf53, GPX4, HNRNPA0, IMPDH2, NAP1L1, NHP2, PTMA, YBX1View in SCUBA
EndothelialMitochondrial Oxidative Stress
Stress
AGTRAP, AP2M1, ECHS1, ECSCR, EIF5A, NEDD8, PARK7, PHPT1 +5 moreView in SCUBA
EnterocytesLysosomal/ferritin housekeeping
Housekeeping
APLP2, CD164, CRIP1, CST3, FTH1, FTL, GPA33, ITM2B +5 moreView in SCUBA
FibroblastsGeneral Housekeeping
Housekeeping
ATP6V0E1, C19orf53, CLTA, ERH, NEDD8, PARK7, SEC11A, SNU13 +4 moreView in SCUBA
Gamma-delta T cellsMitochondrial Dynamics
Mitochondrial & OxPhos
ATP5MC1, ECHS1, FIS1, FRA10AC1, HIGD2A, IFNAR2, MICOS13, MRI1 +2 more
Glial cellsER Translocon Activity
Protein processing & ER
ARPC2, CALR, MRPL52, MYL6, NDUFA1, OST4, PFN1, PPIB +3 moreView in SCUBA
Innate lymphoid cellsSUMOylation Program
Protein processing & ER
ATP5MG, ATP6V1G1, BTF3, C4orf3, COX7C, EEF1A1, HINT1, OSTC +5 moreView in SCUBA
Lymphatic endothelialActomyosin Cytoskeleton
Cytoskeletal
BRI3, CD63, CFL1, CHCHD2, COX4I1, GABARAPL2, HINT1, LGALS3 +8 moreView in SCUBA
MacrophagesProteasome UPS
Housekeeping
ACP1, ARPC5L, ATP6V1G1, AURKAIP1, C19orf53, CHMP2A, CIAO2B, CIB1 +31 moreView in SCUBA
Mucosal-associated invariant T cellCyclophilin-Mediated Folding
Housekeeping
B2M, BBLN, BCL7C, C12orf75, CFL1, EIF3L, ERH, GTF3A +10 more
Smooth muscle cellsOxPhos & Translation
Housekeeping
COMMD6, COX6B1, COX7C, DYNLT1, EIF3H, ELOB, NDUFA13, SRP14 +3 moreView in SCUBA

About the gene

SynonymsCFAP280, EDF-1
Chromosome9: 136862119-136866308
Predicted locationIntracellular
Essential geneNo
Protein classPredicted intracellular proteins
Molecular functionActivator, Calmodulin-binding, Developmental protein, DNA-binding
Biological processDifferentiation, Transcription, Transcription regulation

Function

Transcriptional coactivator stimulating NR5A1 and ligand- dependent NR1H3/LXRA and PPARG transcriptional activities. Enhances the DNA-binding activity of ATF1, ATF2, CREB1 and NR5A1. Regulates nitric oxid synthase activity probably by sequestering calmodulin in the cytoplasm. May function in endothelial cells differentiation, hormone- induced cardiomyocytes hypertrophy and lipid metabolism.

Human Protein Atlas · Open Targets · UniProt

Gene annotation from the Human Protein Atlas and UniProt; see sources & licences.